Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

 Score =  322 bits (825), Expect = 8e-93
 Identities = 169/303 (55%), Positives = 206/303 (67%), Gaps = 4/303 (1%)

Query: 7   RRGLVALFAAAV---SFGAITQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAEQGVQVQW 63
           RR L+   AAAV   SF A+ QA A   RIG QK G L LLK +GTLEKRLA  GV V+W
Sbjct: 8   RRRLIQGVAAAVALPSFAALAQAPARQFRIGNQK-GYLTLLKGRGTLEKRLAPLGVSVKW 66

Query: 64  TEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKGSP 123
           TEF  GP  LE LNVGSIDFG  GE PP+FAQAAGA L YV      P SEA+LVPK S 
Sbjct: 67  TEFTAGPVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVGATVVRPQSEAVLVPKASA 126

Query: 124 IQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVDAW 183
           I++V +LKGKK+ LNKGSNVHY +V+  E  GL Y+D+  VYLPPADARAAFE+GSVDAW
Sbjct: 127 IKTVAELKGKKIALNKGSNVHYFIVKLFEKHGLSYADLNLVYLPPADARAAFEKGSVDAW 186

Query: 184 VIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGEWS 243
           VIWDP+ AAAE+ L AR L D  G+V N  +Y ++ +Y  ++  V+   IEE+  +  W 
Sbjct: 187 VIWDPFLAAAEKSLDARILADATGVVGNRAYYFSSLDYVAKNADVLAIAIEELNKIDVWG 246

Query: 244 QANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLIPKP 303
            AN  E+  ++A L GLP  +   SV R  YG  P+T  ++A QQKIADTF  LKLIPK 
Sbjct: 247 AANKAELAGELAALWGLPKPVAELSVNRSAYGTTPITKAILAEQQKIADTFFDLKLIPKK 306

Query: 304 LSI 306
           +++
Sbjct: 307 INV 309