Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 320 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  276 bits (705), Expect = 6e-79
 Identities = 142/309 (45%), Positives = 198/309 (64%), Gaps = 3/309 (0%)

Query: 4   VFLRRGLVALFAAAVSFGAITQAQA-ESLRIGYQKYGTLV-LLKAKGTLEKRLAEQGVQV 61
           +F RR  +    +  +  A+ Q  A  ++R+GYQK  TL+ +L+ +GTLE+RL   GV++
Sbjct: 5   LFNRRAALGALGSLAAGAALAQGNAPRAVRLGYQKSSTLIAVLRLQGTLEQRLEPLGVKL 64

Query: 62  QWTEFPGGPQLLEGLNVGSIDFGV-TGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPK 120
            W EF  G  LLE LN+ ++DF     +T PVFAQAAGA L +VA E P+P ++AI+V  
Sbjct: 65  SWHEFTSGLPLLEALNLDNLDFSADVADTVPVFAQAAGAQLTFVAQEAPSPTAQAIVVRA 124

Query: 121 GSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSV 180
            SP++SV DLKGK+V   K +  HYLL+ ALE AGL +SDI P YL PAD RAAFE+G+V
Sbjct: 125 DSPLKSVADLKGKRVAFAKAAGAHYLLIAALEKAGLSFSDIDPAYLTPADGRAAFEKGAV 184

Query: 181 DAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVG 240
           DAWV+WDP+ +AA++Q  AR L DG GL    ++YLA+  +A   P V+  +  E+   G
Sbjct: 185 DAWVVWDPFLSAAQKQAGARVLADGTGLASYQRYYLASTRFAQARPDVLGVIYAELEKTG 244

Query: 241 EWSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLI 300
            W + NP+E    +AP  GL A I   +  R+ Y   P+TP+ +  QQKIAD F A KL+
Sbjct: 245 RWVKQNPKEAAALLAPFWGLDAAIVEQANGRRSYAVRPVTPQNITEQQKIADAFLAEKLL 304

Query: 301 PKPLSIKDV 309
           P+ ++  DV
Sbjct: 305 PRRVNAVDV 313