Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 1e-38
 Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 13/297 (4%)

Query: 17  AVSFGAITQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAEQGVQVQWTEFPGGPQLLEGL 76
           A+S  A   +  + LR+G Q+     ++ A G L+    +   QV+W+EF     LLE L
Sbjct: 14  ALSVAATVASAQDVLRVGDQRGNARAVMDASGVLK----DVPYQVEWSEFANAAPLLEAL 69

Query: 77  NVGSIDFGVTGETPPVFAQAAGAD---LLYVAYEPPAPHSEAILVPKGSPIQSVKDLKGK 133
              ++D G  G+ P  FA A G     +    YE       AI+V   +P Q +KDL  K
Sbjct: 70  AAEALDAGSVGDAPLTFAAARGVKAKAIFATKYE-----GNAIIVKNDAPYQGIKDLVRK 124

Query: 134 KVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVDAWVIWDPYQAAA 193
           KV   KGS  H L++++L++AGLK   I PV+LPPA+A  A   GSVDA  +W+PY + A
Sbjct: 125 KVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWEPYISFA 184

Query: 194 EQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGEWSQANPQEVTDQ 253
             +  AR + DGK    +  +++A+         ++   +        W   +PQE +  
Sbjct: 185 TLKSGARIIVDGKN-YPSLSYFIASEAAIEGKRDILKDFVARSAKARAWGLEHPQEYSKI 243

Query: 254 VAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKLIPKPLSIKDVI 310
           +A L+ +P  + L    R+ +    +  +V   QQ   D +    +I K L   D++
Sbjct: 244 IAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLKASDLL 300