Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  158 bits (400), Expect = 1e-43
 Identities = 100/292 (34%), Positives = 159/292 (54%), Gaps = 12/292 (4%)

Query: 12  ALFAAAVSFGAITQAQAESLRIGYQK---YGTLVLLKAKGTLEKRLAEQG---VQVQWTE 65
           AL AAA+ +     A AE++ IG+     Y  ++L K KG +++   + G   V+++W +
Sbjct: 12  ALVAAALLWAG--SAAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQ 69

Query: 66  FPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPKGSPIQ 125
           F GGP + E    G++D    G+TP + A A G D  +V        +EA++V K S ++
Sbjct: 70  FAGGPPVNEAFASGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSVK 129

Query: 126 SVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGSVDAWVI 185
           +VKDLKGKKV   +G NVH LLV  L +AGLK SD++ + L   D   A  +G VDA ++
Sbjct: 130 TVKDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLV 189

Query: 186 WDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAVGEWSQA 245
           W+P     + +  +RTLRDG GL  N    +A  ++A +HP V+   ++ V+   E  ++
Sbjct: 190 WEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGAEALRS 249

Query: 246 NPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQAL 297
           +P      +AP++GL    T  +  R  +   P   E  A Q ++AD+ + L
Sbjct: 250 DPAGSAQVLAPVVGLTPKQTELAFSR--FEWKPTVTE--ADQAELADSVKFL 297