Pairwise Alignments

Query, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score =  258 bits (660), Expect = 1e-73
 Identities = 138/319 (43%), Positives = 194/319 (60%), Gaps = 12/319 (3%)

Query: 7   RRGLVALFAAAVSFGAI-------TQAQAESLRIGYQKYGTLVLLKAKGTLEKRLAEQGV 59
           RRG + L A   S GA+         A   +LRIG+QK G + L K++G LE  L ++G+
Sbjct: 4   RRGTLGLLAG--STGAVFLPHIRRAGAATTTLRIGWQKNGVIALAKSQGALEALLKDRGI 61

Query: 60  QVQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVP 119
           +V+W+EF  GP LLE L  G++D G TG+ PP+FAQAAG +L YV     A    AILV 
Sbjct: 62  EVKWSEFSSGPPLLEALGAGALDIGPTGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQ 121

Query: 120 KGSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERGS 179
           K SP+++++DLKGKKV   +GS+ H + V+AL  AGL  SDI PV L P DA AAF  GS
Sbjct: 122 KDSPLKTLEDLKGKKVAFKRGSSAHNVTVKALRKAGLTLSDITPVDLAPPDAAAAFRSGS 181

Query: 180 VDAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAV 239
           +DAW IWDPY A AE++   R L   +G+VD   ++LA  ++   +P ++  +++E+  V
Sbjct: 182 IDAWSIWDPYFAVAEKEPTTRVLSTAEGIVDPWSYFLANGDFVEANPDLVPLILKELANV 241

Query: 240 GEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQG--YGAAPLTP-EVVAAQQKIADTFQA 296
           G  +QAN       +A + G+P  +T  S+ R G   G   L P E +A QQ +AD F  
Sbjct: 242 GAKAQANIDATAKSLAAITGVPEDVTKVSLTRPGADLGRVSLVPDEAIAYQQALADEFYD 301

Query: 297 LKLIPKPLSIKDVIWTPPA 315
           LK++PK L + D++W P A
Sbjct: 302 LKIVPKKLKVTDIVWRPKA 320