Pairwise Alignments

Query, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

Subject, 450 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  450 bits (1158), Expect = e-131
 Identities = 244/441 (55%), Positives = 306/441 (69%), Gaps = 14/441 (3%)

Query: 9   AVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESG-IDQKESGQGFKLDYLSGFTQ 67
           A+A G LAQQ  A GF++DSK S+SSRT+Y++ D R +G  DQ+++  G +LD+ SG+T+
Sbjct: 13  ALACGTLAQQGYAVGFLDDSKASISSRTLYYDGDQRSTGGADQRQTLTGLRLDFQSGYTE 72

Query: 68  GTVGFGVDVQALWGIHLDGGRGSRPDAN-NTFFPSDSDGSAVHDWARIGGNAKARFSKTE 126
           G VG G+D+QAL G  L GG      +  NT  P  +DGS V +W+RIGGNA+ ++SKTE
Sbjct: 73  GVVGLGLDLQALAGFTLSGGTSPHNASTVNTVSPVTTDGSPVDNWSRIGGNARFKYSKTE 132

Query: 127 VHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSNRTGL 186
           +  G+AL   LP+L+SNDGRLLP +F+G  L S E +NLT+N G L  A+GRASSN  G+
Sbjct: 133 LKAGNALTFNLPVLISNDGRLLPASFQGAALTSNEFENLTLNGGFLNRAIGRASSNWAGI 192

Query: 187 SVSGAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGATHVFKIADNQSFKTD 246
           S  GA + S+ F FAGGD+ +  +L LQYYY+NLED+Y Q+FLG  H F +   QS  TD
Sbjct: 193 SGGGA-KGSDGFAFAGGDWNVRKNLKLQYYYANLEDYYSQNFLGLIHSFDMGVGQSLTTD 251

Query: 247 LRYFDSSSDGKNG-QTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLGHQQVGD 305
           LRYF S SDGKNG  + YA  N  GY +N G++DN TWS  FTY  GGHAL LGHQQV D
Sbjct: 252 LRYFKSDSDGKNGTDSRYALRN--GYNEN-GKIDNTTWSLAFTYKAGGHALTLGHQQVSD 308

Query: 306 DGGFVWLNQGSVRKDGSTSSLEGNGGA-SFYLFTDSMINQFARAGENTTFGQYSYDFAAL 364
             GF  +N  +V  DG     EG GG  S YL+TD M+N F RAGEN+TFG YSYDFAAL
Sbjct: 309 KSGFATVNSSNV-VDG-RGRPEGEGGVQSLYLYTDVMVNSFTRAGENSTFGLYSYDFAAL 366

Query: 365 GVPGLKASVSYLRGDDVR--NRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQGVYR- 421
           GVPGLKA  +Y+ G D+R    +  G YNEWE D R+DY LQ GT KGLGF+LR+GV+R 
Sbjct: 367 GVPGLKAGWTYVSGKDIRGTGNTTTGRYNEWESDYRLDYVLQSGTFKGLGFTLRKGVFRT 426

Query: 422 GSGESAL-DKDQTRFIVNYTY 441
           G  +S L D+DQ RF VNYTY
Sbjct: 427 GLPDSTLKDQDQVRFFVNYTY 447