Pairwise Alignments

Query, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

Subject, 420 a.a., putative Aromatic compound-specific porin from Pseudomonas putida KT2440

 Score =  238 bits (606), Expect = 4e-67
 Identities = 159/460 (34%), Positives = 227/460 (49%), Gaps = 62/460 (13%)

Query: 2   YKSSLALAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQK---ESGQGFK 58
           +K +LA +  L  L     +A FVED K SL  R  Y+N D R  G  Q    E  QGF 
Sbjct: 5   FKKTLACSATL--LVAPYASAAFVEDFKGSLELRNFYYNRDFRNDGATQSKRDEWAQGFI 62

Query: 59  LDYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNT-FFPSDSDGSAVHDWARIGGN 117
           L+  SGFT+G VGFG+D   L G+ LD    S PD   +     DSD     ++ +    
Sbjct: 63  LNLQSGFTEGPVGFGIDAMGLLGVKLD----SSPDRTGSGLLAYDSDRQVEDEYGKFVAT 118

Query: 118 AKARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMG 177
           AKAR  KTE+  G  + P++P+L SN+ RLLPQ F GG+L   +ID LT+ A ++     
Sbjct: 119 AKARMGKTELRIGG-VNPLMPLLWSNNSRLLPQVFRGGSLTVNDIDKLTVTATRINAVKQ 177

Query: 178 RASSNRTGLSVSG-AFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGATHVFK 236
           R S++   L+ +G A  +++ + +   D+K   D+T   + + LED YK +F G   V K
Sbjct: 178 RNSTDFESLTATGYAPVEADHYNYLAFDFKPAKDMTFSLHAAELEDLYKSYFAGIK-VIK 236

Query: 237 IADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHAL 296
                +   D+R FD+S  G               +K  GEVDN+T S+ F Y++ GH +
Sbjct: 237 PLWEGNVIADVRVFDASETG---------------SKKLGEVDNRTLSSYFAYSIKGHTI 281

Query: 297 MLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQ 356
             G+Q+   D  F ++N                 G   YLF +S+++ F    E   F +
Sbjct: 282 GGGYQKAWGDTSFAFVN-----------------GTDTYLFGESLVSTFTAPEERVWFAR 324

Query: 357 YSYDFAALGVPGLKASVSYLRGDDV-------------RNRSGDGTYNEWERDARVDYTL 403
           Y +DFAALGVPGL  +  Y++GDDV             R    DG   EWER   + Y +
Sbjct: 325 YDFDFAALGVPGLLFTTRYMKGDDVNPDLLTSRQAASLRLNGEDG--KEWERVTDISYVI 382

Query: 404 QEGTLKGLGFSLRQGVYRGSGESALDKDQTRFIVNYTYNF 443
           Q G  KG+ F  R    R +   A   ++ R I+ YT+NF
Sbjct: 383 QSGPAKGVSFQWRNSTNRST--YADSANENRLIMRYTFNF 420