Pairwise Alignments

Query, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  273 bits (699), Expect = 6e-78
 Identities = 174/433 (40%), Positives = 222/433 (51%), Gaps = 53/433 (12%)

Query: 19  AGAAGFVEDSKLSLSSRTMYFNDDNR-ESGIDQK----------ESGQGFKLDYLSGFTQ 67
           AGAAGF+EDSKL L  R +YFN++ R E G+  +          E  QGF LDY SGFTQ
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQ 80

Query: 68  GTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNAKARFSKTEV 127
           GT+G GVD   L G+ LD GRG    +     P   DG A  ++A  G  AKAR   T V
Sbjct: 81  GTLGLGVDAMGLLGVRLDSGRGR---SGTGLLPVHDDGRAADEFASAGITAKARLGSTVV 137

Query: 128 HYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSNRTGLS 187
            +G+ L P  P+LV ND RLLPQT++G  L S +IDNLT+ AG L     R SS+ TGL 
Sbjct: 138 KHGTLL-PKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLY 196

Query: 188 VSG-AFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGATHVFKIADNQSFKTD 246
           + G     S  F FAG DY ++  L L Y++  LE FY+Q F G  H   +       TD
Sbjct: 197 LDGYGGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVHDLPLGGG-VLTTD 255

Query: 247 LRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLGHQQVGDD 306
           LRYF S   G    T Y            G +DN  +S   +Y   GH +  G+Q +  +
Sbjct: 256 LRYFKSRDSG----TAY-----------GGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGE 300

Query: 307 GGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYSYDFAALGV 366
            G  +++                 GA+ Y F++  I +F    E T    Y+Y+FAA GV
Sbjct: 301 AGLPYIS-----------------GATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGV 343

Query: 367 PGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLRQGVYRGSGES 426
           PGL     YL GD+   RSG     EWERDA + Y +Q G LKGLG  LR  VYR   + 
Sbjct: 344 PGLTFMTRYLSGDN--GRSGGEGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYR--SDF 399

Query: 427 ALDKDQTRFIVNY 439
           A  +D  R  + Y
Sbjct: 400 ARGRDSNRLYLTY 412