Pairwise Alignments

Query, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  243 bits (621), Expect = 7e-69
 Identities = 160/448 (35%), Positives = 233/448 (52%), Gaps = 53/448 (11%)

Query: 4   SSLALAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQK----ESGQGFKL 59
           S++A A+AL  +A  + AA F EDS  +  +R MYFN D R+    Q+    E  QGF L
Sbjct: 20  SAIASALALAGVAPMSQAA-FFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFIL 78

Query: 60  DYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNT-FFPSDSDGSAVHDWARIGGNA 118
           ++ SG+T GTVGFG+D   + GI LD    S PD  ++   P+  DG A  +++++G   
Sbjct: 79  NFESGYTDGTVGFGLDALGMLGIKLD----SSPDRTDSGLLPTHDDGKAADEYSKLGLTG 134

Query: 119 KARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGR 178
           K + S+TE+  G+ L P LP L  NDGR+LPQTFEGG L SKEI  LT   G++  A  R
Sbjct: 135 KVKISQTELKIGT-LIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDR 193

Query: 179 ASSNRTGLSVS------GAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGAT 232
             +N   L+++      G    ++     G DY+ T  +T  Y+++ L+D Y+QHF+G  
Sbjct: 194 NDTNWEDLALNNKNGRFGGTFSADNLALGGLDYQFTDRITGSYHFAQLDDIYRQHFIGMV 253

Query: 233 HVFKIADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLG 292
                    +   DLR               A  ++ G AK +G +DN T + M +Y LG
Sbjct: 254 ATQPWGPG-TLGADLR--------------LAMSDDAGAAK-AGNIDNTTVNGMLSYALG 297

Query: 293 GHALMLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENT 352
           GH +    QQ+  +  F +++                 GA  YL     IN FA A E +
Sbjct: 298 GHKVSAAWQQLSGESAFPYVD-----------------GADPYLVNFVQINDFAGADERS 340

Query: 353 TFGQYSYDFAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLG 412
              +Y Y+FAALGVPGL     Y+ GD+V +R+  G   EWER+  + Y +Q G LK + 
Sbjct: 341 WQARYDYNFAALGVPGLTFMTRYISGDNV-SRAAGGEGKEWERNTELKYVVQSGPLKNVA 399

Query: 413 FSLRQGVYRGSGESALDKDQTRFIVNYT 440
             LR   +R +   A D D+ R +V+Y+
Sbjct: 400 VRLRNATFRSN--FARDADEVRLLVSYS 425