Pairwise Alignments

Query, 323 a.a., taurine ABC transporter periplasmic binding subunit from Pseudomonas putida KT2440

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 72/244 (29%), Positives = 101/244 (41%), Gaps = 18/244 (7%)

Query: 12  ALTLASTSWLAQAADLTV--------AYQTTVDPAKVAQVDGDYEKASKASID--WRKFD 61
           AL  A+  W   AA  TV         Y   +   +   VD ++ KA    ++  W +F 
Sbjct: 12  ALVAAALLWAGSAAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQFA 71

Query: 62  NGADVITAVASGDVQIGYLGSSPLAAAATRKLPVETFLIATQIGAGEALVAR--DSIKSP 119
            G  V  A ASG + I  LG +P   A    +      +A +    EAL+     S+K+ 
Sbjct: 72  GGPPVNEAFASGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSVKTV 131

Query: 120 QDLIGKKVAVPFVSTGHYSLLAALKSWNIDPSKVQILNLAPPAIIAAWKRGDIDATYVWD 179
           +DL GKKVA       H  L+  L    +  S V+ LNL    +  A  +GD+DA  VW+
Sbjct: 132 KDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLVWE 191

Query: 180 PALGVAKENG--KVLITSGELAQKGAPTFDAWIVRKDFAEKHPDVVKAFAKVTLDAYADY 237
           P L      G  + L     L     P     +    FA KHPDV+KA+ +         
Sbjct: 192 PLLTKLDSEGVSRTLRDGAGLKSNLNPI----VALGSFAAKHPDVLKAYLQAVKRGAEAL 247

Query: 238 RKDP 241
           R DP
Sbjct: 248 RSDP 251