Pairwise Alignments

Query, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

Subject, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

 Score =  124 bits (310), Expect = 3e-33
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 32/281 (11%)

Query: 9   LNASLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTGFEVELS 68
           LNA  A++ G  L +     +  K+I       +  EG+Y P++F+D  GKL GF+++L 
Sbjct: 6   LNALAAVVTGVLLAAGPTQAKDYKSI------TIATEGSYAPYNFKDAGGKLIGFDIDLG 59

Query: 69  ELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQA 128
             L K + ++ K     WDGI+ +L + R D ++  + I   R+K   FS PY ++ +  
Sbjct: 60  NDLCKRMNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTF 119

Query: 129 L------ILKKKAEQLNI--------------KGAQDLAGKKVGVGLGTNYEQWVKKDVP 168
           L      +LK +    N+              K  +   G K GV  GT++E ++K+ +P
Sbjct: 120 LTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMP 179

Query: 169 QADVRTYEDDPSKFADLRNGRIDAIL--IDRLAALEYAQKAKDTELAGDAFS----RLES 222
              + TY+   +   DL+ GRIDA L  +  L  L      KD ++ G   +        
Sbjct: 180 SVQISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGV 239

Query: 223 GVALRKGEPELLAAINKAIDKLKADGTLAKLSEKYFGADVT 263
           GV +RK + +L A  +KAID   ADGT+ KLS+++FG D +
Sbjct: 240 GVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDAS 280