Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  476 bits (1224), Expect = e-138
 Identities = 257/551 (46%), Positives = 345/551 (62%), Gaps = 5/551 (0%)

Query: 79   EDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHH 138
            +    LR+AAAVF ++ +G++VT+ +  +  VN AF RITGY ++E++GQ      SG H
Sbjct: 680  QTERHLRLAAAVFANSHDGLVVTNLKSEVSAVNPAFSRITGYAEEEILGQNMRLLHSGRH 739

Query: 139  GLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISA 198
               FY+ +++ L   G W GEIWNRRK+GEI+ Q   I  + DD G   ++V  F DI+ 
Sbjct: 740  DREFYRSLWSELTTAGIWQGEIWNRRKNGEIFLQQLNISTVYDDSGAAQNFVGAFQDITQ 799

Query: 199  IKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDG 258
             KHSE EL  +AH+DPLT LPNR L    L+  LA ++   R CA+L +DLD F+++ND 
Sbjct: 800  AKHSEFELDRIAHYDPLTDLPNRTLLASLLD--LAVSRPGSR-CAVLFVDLDRFKTVNDS 856

Query: 259  LGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMR 318
            LGH  GD +L++  +R+ + L  G TL R GGDEF +++E       A  LA  +I++M 
Sbjct: 857  LGHMAGDAVLQMAAQRIQDELEAGATLGRHGGDEFVIILEGISGPEDAATLANHVIQQMG 916

Query: 319  EPFQFDGN-RLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTA 377
             PF   G   +++ ASVGISL+P DA     LL++ADSAL +AKS+GR  YA YT+ LT 
Sbjct: 917  RPFSMPGGGEIYLGASVGISLFPEDADTPASLLQHADSALAEAKSHGRGGYAFYTQALTR 976

Query: 378  HAQHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIP 437
             A+ R+E  A+LRRAL +DE  + FQPV +LA+GR  G E LVRWQ P  GLV P  FIP
Sbjct: 977  GARVRMEMEADLRRALARDEFILNFQPVVNLATGRITGTEALVRWQSPTHGLVTPNRFIP 1036

Query: 438  IAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHD 497
            +AE TGLI  +  WV+  ACRQM +W  +G  L F+ VN+S R F +  L   V +VL  
Sbjct: 1037 LAEETGLIEPLGNWVMEAACRQMAEWLDKGADLDFIAVNLSPRQFQRGALCEFVDDVLRR 1096

Query: 498  TGLAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQK 557
            TGL    LE+E+TES + +    A  +L +L++ GV +A+DDFGTGYSSL  LKR P+ K
Sbjct: 1097 TGLPAHKLEVEITESLLFDARAAAERKLRQLKDTGVRIALDDFGTGYSSLAYLKRFPISK 1156

Query: 558  LKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGY 617
            LKID+ FV  LP    D  I   II++AR++G  V AEGIE   Q  FL    C  GQG+
Sbjct: 1157 LKIDRSFVRDLP-RAADAEIATAIISIARALGFSVVAEGIEDPRQHDFLKARGCDFGQGH 1215

Query: 618  WFGRPVPAEDL 628
             F R V  E L
Sbjct: 1216 LFSRAVTGERL 1226



 Score = 35.4 bits (80), Expect = 2e-05
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 4/134 (2%)

Query: 74  ARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKF 133
           AR   E   R R   A FD    G+L  D  G I+  N    R+ G     + G+R  + 
Sbjct: 426 ARAVSEAEARFR---AAFDQAATGILHLDLDGTILRANDKACRMLGRPASALTGERLWQL 482

Query: 134 KSGHHGLAFYQEVFATLAEK-GEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAV 192
           +S  H  A    +   L  +  E   E       G       T   +R+ +G   H + V
Sbjct: 483 RSPDHAAAGADVIRPLLDGRIAEIETEESLVHPDGSAVWLAFTFSLVRNADGAADHLLLV 542

Query: 193 FSDISAIKHSEQEL 206
             DISA + +E  L
Sbjct: 543 AQDISARRAAEAAL 556