Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  504 bits (1297), Expect = e-146
 Identities = 260/547 (47%), Positives = 351/547 (64%)

Query: 81   RERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGL 140
            +E+L++AA VF++T EGVL+TD    I  VNRAF  ITGY + E +GQ P    SG H  
Sbjct: 678  QEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALGQTPRLLASGQHDS 737

Query: 141  AFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIK 200
            AFY  ++  L  +G W GEI+N+RK+GE+YP W TI A+R+ + E++H+VAVF+DIS+IK
Sbjct: 738  AFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIK 797

Query: 201  HSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLG 260
            H++ +L Y AHHDPLTGLPNR LF +RL+  L  AQ + R  A+L LDLD F+ IND LG
Sbjct: 798  HAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLG 857

Query: 261  HTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREP 320
            H +GD LLK + +RL E + +  T+ARLGGDEF +L+    +   A  +A  ++     P
Sbjct: 858  HPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAP 917

Query: 321  FQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQ 380
            FQ   +  F SAS+GISLYP D      L+RNAD+A+Y++K+ GR     YT +LTA A 
Sbjct: 918  FQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQAS 977

Query: 381  HRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAE 440
             R+    ELRRA+E++E+ + FQP   L +   VG E L+RW HP  G VPP  FI +AE
Sbjct: 978  ERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAE 1037

Query: 441  RTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGL 500
              G I ++  WVL QACRQM  W+   +    + +N++        L R++ ++L    L
Sbjct: 1038 ENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQL 1097

Query: 501  APALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKI 560
                L+LE+TE+ +M   E AL  L++L++LGV LAIDDFGTGYSSL  LKRLP+  LKI
Sbjct: 1098 KAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 1157

Query: 561  DQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFG 620
            D+ F+ GLP D  D AI R IIAL RSM + + AEG+E   Q  FL  E C+  QGY   
Sbjct: 1158 DKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVS 1217

Query: 621  RPVPAED 627
             P+P E+
Sbjct: 1218 LPLPPEE 1224



 Score = 30.8 bits (68), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 88  AAVFDSTLEGVLVTDRQ-GLIVHVNRAFMRITGYQQDEVIGQ 128
           A  F ++ +G+L++ +  GL++ VN  F R+TGY  +  I Q
Sbjct: 564 AKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQ 605



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 77  RCEDRERL--RMAAAVFDSTLEGVLVTDRQ-GLIVHVNRAFMRITGYQQDEVIGQRPSKF 133
           R ED  RL  +  A+VF    + +L+     G ++ VN AF    G   D+VIG+  +  
Sbjct: 427 RTEDALRLSEQKFASVFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDL 486

Query: 134 KS-GHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAV 192
              G  G      +   L + G  + E+  RR +G+++    T     + +G  +  VAV
Sbjct: 487 DLWGVEGSG--PLLLERLHQGGIRNLEMSFRRSNGQLF-TGLTSAETFELDGTPALVVAV 543

Query: 193 FSDISAIKHSEQEL 206
             DIS +K ++Q+L
Sbjct: 544 -RDISQLKETQQQL 556