Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 861 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  390 bits (1003), Expect = e-112
 Identities = 204/427 (47%), Positives = 268/427 (62%)

Query: 200 KHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGL 259
           + +E +L YLAHHDPLTGLPNRLL   R EQ +  A   + G A+L LD+D+F+ IND  
Sbjct: 422 RDAETKLEYLAHHDPLTGLPNRLLLRKRFEQFIHQANKREYGLAMLFLDMDNFKEINDSF 481

Query: 260 GHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMRE 319
           GH IGD LLK V  RL  +L     L+R GGDEF +L+ N Q      + AQ I+  M+E
Sbjct: 482 GHAIGDALLKEVVRRLERMLSEACMLSREGGDEFVLLINNAQASDIVTQTAQQILNAMQE 541

Query: 320 PFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHA 379
           PF+  GN L  S S+GISLYP+D    E L +NAD+ALY AK  GR  Y  +  ++ A A
Sbjct: 542 PFEVSGNTLHASFSIGISLYPNDGKDFETLRKNADAALYLAKDCGRNTYRFFVTQMNADA 601

Query: 380 QHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIA 439
           Q R+    +L  AL+ +E  +++QP   L+ GR  G+E L+RWQ+    ++PP EFIPIA
Sbjct: 602 QKRMRIQTDLHTALKNNEFLLHYQPQIRLSDGRISGIEALIRWQNADGQMLPPSEFIPIA 661

Query: 440 ERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTG 499
           E++GLI ++  WVLR+ACRQ+  W  QG+    V VN+SS  F    +   ++  L+D G
Sbjct: 662 EQSGLIIQMGQWVLREACRQLAAWHKQGQTQLVVAVNLSSHQFRHGNIVETISSALNDFG 721

Query: 500 LAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLK 559
           L P  LELE+TES +++D E  +  LH L+ +GV LAIDDFGTGYSSL  LKRL V KLK
Sbjct: 722 LPPQCLELELTESILIQDTESVISTLHTLKHIGVKLAIDDFGTGYSSLSYLKRLSVDKLK 781

Query: 560 IDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWF 619
           ID+ F+  L  D+D   IVR II L   + + V AEG+E  +Q +FL    C   QGY F
Sbjct: 782 IDKSFIRDLHKDQDSAEIVRAIIQLGHILQLTVIAEGVETEQQLAFLTDSHCDEIQGYLF 841

Query: 620 GRPVPAE 626
            RPV AE
Sbjct: 842 SRPVAAE 848



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 96  EGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLAEKG- 154
           E V+  DR     ++N A +++ G    ++ G+ PS  +     L  YQE    + E G 
Sbjct: 17  EPVIHYDRDCKRTYLNPAAIKLIGEPAKDLQGKTPSSLRPSSVALQHYQEKIRGVIETGT 76

Query: 155 --EWSGEIWNRRKSGEIYPQWQTICAI--RDDEGELSHYVAVFSDISAIKHSEQELAYLA 210
             E+   +        ++ +   I A+   D +  +   +A+  DI+A+K SE+ L  L 
Sbjct: 77  DIEFDFFLDRLPDGPNVHTKVLRIHAVPELDSDNNVVGALAIAHDITALKLSEKRLRALI 136

Query: 211 HHDP 214
            + P
Sbjct: 137 ENHP 140