Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 703 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  430 bits (1106), Expect = e-125
 Identities = 241/582 (41%), Positives = 339/582 (58%), Gaps = 6/582 (1%)

Query: 49  VVWVLLSALLIYVSRVRLLNFIG--HGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGL 106
           ++W+  +A  +Y  R RL+ + G       R +  E LR+AA VF++  E ++VTDR+  
Sbjct: 107 IIWIAENARAVYDGRDRLVCYEGTVQNITARKQAEESLRLAATVFETVGEAIVVTDRERR 166

Query: 107 IVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKS 166
           I+ VN AF R+TG+   E++GQ          GL   +E++   A  G+WSGE W RRK 
Sbjct: 167 ILAVNAAFERMTGWNAAEMVGQTCDLLAVEMIGLREIEEMWRLAANTGQWSGETWTRRKE 226

Query: 167 GEIYPQWQTICAI---RDDEGELSHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLL 223
            E +P    + A+    D +GE   +V +  DI+  +  EQ + + A HD LT LPNR  
Sbjct: 227 SEPFPAALALTAVDQGADAKGEDGRFVLLLRDITRKRRDEQRIRFHASHDALTRLPNRHT 286

Query: 224 FTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGV 283
             + L +A+  A+      A+L LD++ F+ IND  GH +GD+LL+ V  RL   +    
Sbjct: 287 VMEALGEAIVRAEQTGERLAVLYLDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASD 346

Query: 284 TLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDA 343
            + RLGGDEF +L+ +      A   A  ++    EPF  +G +LF   S+GI+LYP DA
Sbjct: 347 VIGRLGGDEFVMLLPSVGDHTAAQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDA 406

Query: 344 LGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQ 403
            GAE LL  AD+A+Y AK  G   Y+ +  E+      RV    +LR AL +D+ R+ +Q
Sbjct: 407 DGAESLLSRADAAMYHAKRGGLP-YSCFDIEMDRQVAERVSLENDLRLALGEDQFRLVYQ 465

Query: 404 PVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQW 463
           P  D  SG  +G E L+RW+HP R  V PG FIP+AER GLI  ID WVL +ACRQ+ +W
Sbjct: 466 PKVDALSGAIIGAEALIRWRHPVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVAEW 525

Query: 464 QAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALE 523
           +AQG  L  + VN+S   F    L  +V   L  +GL P++LELE+TE+ +  D + A+E
Sbjct: 526 RAQGLILPSISVNLSPAQFHDGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIE 585

Query: 524 QLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIA 583
            L +L  LGV +++DDFGTGYSSL  LK  PV  LKID+ FV  LP +  D AI+  +IA
Sbjct: 586 ILGQLTTLGVRVSLDDFGTGYSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIA 645

Query: 584 LARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPA 625
           LA ++G  V AEG+E  EQA+FL    C + QG+ F RPV A
Sbjct: 646 LAGNLGFSVIAEGVETREQAAFLAARGCPIMQGFLFSRPVNA 687



 Score = 35.4 bits (80), Expect = 9e-06
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 22/163 (13%)

Query: 89  AVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLA------- 141
           ++F++ +EG+  T   G  +  N A  RI GY+        P++  +G   +A       
Sbjct: 25  SLFENAVEGIYRTTPDGRYLDANPALARIYGYKD-------PAELIAGLTDIARGLYVDP 77

Query: 142 ----FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDIS 197
                ++E+ A  +    +   +  R +SGEI    +   A+ D    L  Y     +I+
Sbjct: 78  ADRERFREILARDSVVRNFEARV--RTRSGEIIWIAENARAVYDGRDRLVCYEGTVQNIT 135

Query: 198 AIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKR 240
           A K +E+ L   A      G    ++ TDR  + LA   A +R
Sbjct: 136 ARKQAEESLRLAATVFETVG--EAIVVTDRERRILAVNAAFER 176