Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 833 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  377 bits (969), Expect = e-109
 Identities = 217/575 (37%), Positives = 329/575 (57%), Gaps = 16/575 (2%)

Query: 65  RLLNFIGHGARLRCEDRERL----RMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGY 120
           RL   IGH   LR  +   L         + ++  + +   D +G  +  N+ ++ + G 
Sbjct: 248 RLYVAIGHDITLRKANEAELVNQKEWLTTLINALPDLICFKDGKGRWLVANQFYLDLVGL 307

Query: 121 QQDEVIGQRPSKFKSGHHGLAFYQEVFATLAEKGE--WS-GEIWNRRKSGEIYPQWQTI- 176
              + +G+   +     H    +QE   T  E  E  W  G+  +  K+ E   +   + 
Sbjct: 308 SGVDYVGRTGPELARLSHN---FQEFLTTAKETDERAWKDGKPLSYEKAMETPSRGTKVF 364

Query: 177 ----CAIRDDEGELSHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLEQAL 232
                 +   +G  S  V V  D++  K +   + +LAHHD LT LPNR+LF +RL Q+L
Sbjct: 365 DMLKIPLFKPDGRRSGLVLVGRDVTERKLAAARIQHLAHHDALTELPNRVLFQERLRQSL 424

Query: 233 AAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDE 292
           A A+ +    AL+ LDLD F+ IND LGH +GD LL+ V +RL   +    T+ARLGGDE
Sbjct: 425 AQAKRSGWKLALMFLDLDKFKDINDTLGHHVGDLLLRAVAKRLTRCVRETDTVARLGGDE 484

Query: 293 FGVLVENCQQVGQAGKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRN 352
           F V++ N   +  A ++A+ II  + +PF  D + +  S S+GI+LYP D++ A+QLL+N
Sbjct: 485 FAVILTNLDDLEGASRVAESIIAGIADPFGLDEHEVRTSTSIGITLYPDDSIDADQLLKN 544

Query: 353 ADSALYKAKSNGRACYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVHDLASGR 412
           AD A++++K+ GR  Y  Y  ++ A  + R     +LR+AL  ++L +++QP+ +++S R
Sbjct: 545 ADLAMFRSKAEGRNNYHFYVAQMDAEVRARKLIENDLRQALGTEQLELHYQPLVEMSSRR 604

Query: 413 QVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAF 472
            VG E L+RW HP RG VPPGEFIPI ER+ LI  +  W+L +AC+Q  +WQ  G +   
Sbjct: 605 IVGCEALLRWNHPTRGWVPPGEFIPIIERSDLIGPLGRWILHRACQQGREWQRDGLEPMK 664

Query: 473 VGVNISSRLFGQ-HELYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRLREL 531
           + VN+S   F Q   +   VA++L  TG AP  L+LE+TE   M++ +  +E L  LR +
Sbjct: 665 IAVNLSPAQFKQTQSIIAMVADILDQTGFAPDQLQLEITEGIAMQNVDATIEVLQSLRAM 724

Query: 532 GVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSMGMQ 591
           GV ++IDDFGTGYSSL  LKR PV KLKID+ FV  + +  D+ A+V  I+ L  S+  +
Sbjct: 725 GVVISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVEAIVNLGHSLRTR 784

Query: 592 VHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPAE 626
           V+ EGIE  EQ  FL   +    QG++F + VPA+
Sbjct: 785 VNVEGIETKEQLDFLQAHKVDEAQGFYFSKAVPAD 819



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 89  AVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPS 131
           A+ D+T + ++     G I   N +  RI GY   E++G++ S
Sbjct: 162 AIVDNTADAIVTFGEDGGIGTYNPSAERIFGYAPPEIVGKQIS 204