Pairwise Alignments

Query, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 831 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  419 bits (1076), Expect = e-121
 Identities = 220/548 (40%), Positives = 319/548 (58%)

Query: 82  ERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGLA 141
           ERL +  AVFD+  EG+  TD    I+ VN AF  ITGY  +E IG  P    SG H  A
Sbjct: 29  ERLSLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGNDPRMLSSGFHDPA 88

Query: 142 FYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIKH 201
           FYQE++  L+  G+W GE+ +R K G     W +I + R  +G+++  +AVF D++  + 
Sbjct: 89  FYQEMWDQLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGADGKVARRIAVFRDVTEARE 148

Query: 202 SEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLGH 261
           + ++L   ++ DPLT LPNR LF DRL QAL  A       A+L + LD F++IND LGH
Sbjct: 149 TAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGLDGFKNINDSLGH 208

Query: 262 TIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREPF 321
            IGD++L+    R    L  G T AR GGDEF V++   +   +   + + ++E ++EPF
Sbjct: 209 WIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAVIRSVLEVLQEPF 268

Query: 322 QFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHAQH 381
             + + + IS S+G+ ++P D    + L+RNA +AL +AK  GR  +  +T  + A AQ 
Sbjct: 269 VVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRNTFRFFTPAMDARAQA 328

Query: 382 RVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIAER 441
           R   A EL  AL Q E  + FQP+ D+ SG+    E L+RW +   G+V P +F+P+AE 
Sbjct: 329 RSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGVVSPDQFVPLAEE 388

Query: 442 TGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTGLA 501
            GLI  I  W+L  ACR+ + WQ  G     + VNIS R F Q ++   +   L DT L 
Sbjct: 389 IGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVGIIRRALEDTRLP 448

Query: 502 PALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLKID 561
           P LL +E+TE  ++ + E  L ++  +R LGV+L++DDFGTGYSSL  LK  PV  LKID
Sbjct: 449 PWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSYLKSFPVDVLKID 508

Query: 562 QGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWFGR 621
           + F+A +    DD  +V  IIAL  S+ ++V AEG+E  +Q  F+  + C + QGY+F  
Sbjct: 509 RSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQGCDVAQGYYFSP 568

Query: 622 PVPAEDLR 629
           P+     R
Sbjct: 569 PLSGPRFR 576