Pairwise Alignments

Query, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 272 a.a., Alkanesulfonates transport system permease protein from Sphingobium sp. HT1-2

 Score =  142 bits (359), Expect = 6e-39
 Identities = 88/250 (35%), Positives = 131/250 (52%), Gaps = 4/250 (1%)

Query: 4   NLKRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHL 63
           +L R+  R  S L  LL W++ +      GL+    +  P AV+    Q++ S  L ++L
Sbjct: 20  SLARFGGRWLSPLLLLLLWELGSRT----GLIPERTLAAPSAVIGTLIQMVLSGELPSNL 75

Query: 64  GSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPS 123
             S  RV  G      +G+ALGL  G S+ AE  + P +++ R IPA+A  PL I+ F  
Sbjct: 76  LVSFGRVAVGLLIGVGLGLALGLAAGLSRGAELAIDPLMQIKRTIPALALTPLFIVWFGI 135

Query: 124 SELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIV 183
            E   + +   G +FP+ LN   G+  VDPRL+ +A+S G  RW  +  VVLP ALPS++
Sbjct: 136 GETPKIALIAFGTIFPVYLNLYAGIRGVDPRLLDAAKSFGLSRWEQVWHVVLPAALPSLL 195

Query: 184 TGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALV 243
            GL   +  S   LV AE I+   G+GY    +        IVV +++  +LG+G+  LV
Sbjct: 196 VGLRYALSISILVLVVAEQINASAGLGYLINNARDFMRTDIIVVCLMVYAILGLGADWLV 255

Query: 244 KRLGALATPW 253
           + L A A  W
Sbjct: 256 RSLEARALVW 265