Pairwise Alignments

Query, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 313 a.a., ABC transporter, membrane spanning protein (nitrate/sulfonates) from Agrobacterium fabrum C58

 Score =  163 bits (413), Expect = 4e-45
 Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 4/232 (1%)

Query: 5   LKRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHLG 64
           L  + VR+  L+A +  WQVA     D G +    +P P  ++   W +  S  L  H+ 
Sbjct: 62  LSAFAVRVGPLVALVTVWQVAC----DFGAVRPVLLPAPSTIVRTIWNMTLSGELAEHVA 117

Query: 65  SSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSS 124
            S ARV  G+  AA++ +ALG+++G            ++VL+PIP +AWIPL+IL F   
Sbjct: 118 VSSARVLQGFGIAAVLALALGIVMGLIGPLNRLADLMVQVLKPIPPIAWIPLSILWFGIG 177

Query: 125 ELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVT 184
           E + +FI   GA FPIL++T+  V   D R V  AR L   R   +R+V++PGALP I++
Sbjct: 178 EEAKIFIIVLGAFFPILVSTLDAVHQTDVRYVELARVLEVPRLNFIRQVMIPGALPQIMS 237

Query: 185 GLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLG 236
           GL +G+  SW C+V AE+I+   GIG+   +   + N   ++ GM+ +GVLG
Sbjct: 238 GLRLGITMSWMCVVAAELIAASSGIGFLIMDGRVMSNASVVLAGMITLGVLG 289