Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 370 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 39/264 (14%)

Query: 5   ATVAGLALALTGLNASAETI----RIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKY 60
           A  A + LAL    A+AET+       +G +    +        R   L++K    D   
Sbjct: 15  AASALICLALLAAPAAAETVIRFGHPGVGAEQRPYSYGDATTYARARQLIEKEFADDKDV 74

Query: 61  KDATYQVEWKNFTSGAPLTNEMVA-GKLDFGAMADFP---GSFNGVAHLDAGKRSLFISV 116
           K     +EW  F    P  NE VA G+LDF  + D P   G   G+ H     + +F + 
Sbjct: 75  K-----IEWTFFRGAGPALNESVASGQLDFFLLGDLPAIVGRARGLKH-----KFIFATG 124

Query: 117 LSGSVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRI 176
            +  +      + VP  S++  + ++KGK +++   +       R +A  G   +KDVR 
Sbjct: 125 RNNPIF-----LAVPTDSTITKVEDVKGKKVALFKGTNLQNATDRILALHGLS-EKDVRF 178

Query: 177 IAQAPEIAGSALRSNRIEA---HADFVPFAELFPNRGFARKIYDGAQANAPTF---HGAL 230
           I      A +AL S  ++A     +++P A     +G  + +Y   + + PT        
Sbjct: 179 INLDANAAVAALTSGNVDAVFGGQEYLPLAA----KGVVKIVYT-TKGDDPTLGRNSSYF 233

Query: 231 VDADYAKKYPE----VVTAYLRAS 250
           V   +A  +P+    VVTA+++A+
Sbjct: 234 VTEAFAAAHPDLTQRVVTAFIKAA 257