Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 334 a.a., Putative aliphatic sulfonates-binding protein from Xanthobacter sp. DMC5

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 27/276 (9%)

Query: 7   VAGLALAL---TGLNASAET-IRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKD 62
           VAGLAL L   T   A A T +R+      T I       +++  G L+K L   G    
Sbjct: 25  VAGLALTLALATAAAAQAPTKVRVGYQRSSTLIT------VLKTNGTLEKALAPLG---- 74

Query: 63  ATYQVEWKNFTSGAPLTNEMVAGKLDFGA-MADFPGSFNGVAHLDAGKRSLFISVLSGSV 121
              +V W  FTSG PL   +  G +DF A +AD    F   A    G + ++++  + S 
Sbjct: 75  --VEVSWHEFTSGLPLLEAVNVGSIDFSADVADTVPVFAQAA----GAKLVYVAEEAPSP 128

Query: 122 HGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAP 181
             S   I+VPA S + +L +LKGK + V   + +H +LL A+A  G    +D+      P
Sbjct: 129 --SAQAILVPANSPITTLEQLKGKKVGVTKGAGSHYLLLVALAKAGLS-IRDITPAYLTP 185

Query: 182 EIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDG-AQANAPTFHGALVDADYAKKYP 240
             A +A  S  ++A   + PF     ++  AR + DG   AN   ++  L   D++K+  
Sbjct: 186 ADARAAFVSGNLDAWVAWDPFLASTQSQSGARVLADGTGLANYKRYY--LTTEDFSKRGG 243

Query: 241 EVVTAYLRASLEADRLIAAQPEKYSELIEKVTGIEA 276
           +V+             + A P   +E++  + GI+A
Sbjct: 244 KVLDVLFERLKATGEWVKANPGPAAEILAGLWGIDA 279