Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 319 a.a., Putative aliphatic sulfonates-binding protein from Xanthobacter sp. DMC5

 Score = 80.5 bits (197), Expect = 7e-20
 Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 22/277 (7%)

Query: 3   LVATVAG-LALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYK 61
           L + +AG LAL      A  + +RI      T I       L++  GLL+  L      K
Sbjct: 13  LASGLAGALALGAAPARAQEKVVRIGYQKYGTLI-------LLKNKGLLEPLL------K 59

Query: 62  DATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSV 121
              Y V+W  F +G  L   + AG +DFG   + P  F   A    G   +++     + 
Sbjct: 60  PLGYSVKWAEFPAGPQLLEALNAGAVDFGNTGEAPPIFAQAA----GAPLVYVGYEPAAP 115

Query: 122 HGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAP 181
            G    I+VP  S ++++A+LKGKT+++   S  H +L++A+   G  P  D++     P
Sbjct: 116 QGEA--ILVPKDSPLKTVADLKGKTVALNKGSNVHYLLVKALEKAG-VPYSDIKTAYLTP 172

Query: 182 EIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPE 241
             A +A     ++A A + PF         AR++ DG       +   L    +  + P+
Sbjct: 173 ADARAAFERGSVDAWAIWDPFQAAAEKTIDARQLADGT-GIVSNYQFYLSTRSFVDQAPQ 231

Query: 242 VVTAYLRASLEADRLIAAQPEKYSELIEKVTGIEAEV 278
           VV   L+   E    + A P+  +     + GI A +
Sbjct: 232 VVDVLLKGVAEVGAWVKANPKAAAAEFSPLIGIPAPI 268