Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 328 a.a., taurine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 25/291 (8%)

Query: 57  DGKYKDATYQ-VEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFIS 115
           DG Y+ A  + + W+ F SG  +   + +G +  G +   P     +A   +    +   
Sbjct: 45  DGLYEKAIGEKIAWRRFNSGPEVVTAIASGDVQIGNLGSSP-----LAAAASRNLPIVAF 99

Query: 116 VLSGSVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVR 175
           ++S  ++ S   +VV   S + +  +L GKTI+ PF ST+H  LL A+   G D ++   
Sbjct: 100 IVSAQINTS-EALVVRNGSHIDAPKDLIGKTIATPFVSTSHYSLLGALKHWGLDTRQVKV 158

Query: 176 IIAQAPEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQA---NAPTFHGALVD 232
           +  Q  EIA +  R    +    FV    L   R   + + D AQ     APTF   +  
Sbjct: 159 VNLQPAEIAAAWKRG---DIDGAFVWSPALGEIRKTGKTLTDAAQVGQWGAPTFEVWVAR 215

Query: 233 ADYAKKYPEVVTAYLRASLEADRLIAAQPEKYS------ELIEKVTGIEA-EVNYLFHGP 285
            D+A+K+P++V  + + +L++    AA  + ++      + I K+TG  A ++  L  G 
Sbjct: 216 KDFAEKHPDIVAKFAKVTLDSFAEYAAHKDGWTVDSEPVQKIAKLTGSNAVDIPELLAGT 275

Query: 286 LGLQTRDLTWKPEYRQAVATSI-DTLKLLK---KTDRGL-DTGKFIDDQYI 331
                +        +   AT+I +T K LK   K +  L D   F+ D +I
Sbjct: 276 TFPDAQAQQTDALLKGGTATAIGETAKFLKEQGKVETVLPDYSAFVTDTFI 326