Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 322 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 26/299 (8%)

Query: 20  SAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDATYQVEWKNFTSGAPLT 79
           +AET+RI      T +       L++  G L+K L   G        V+W  F  G  L 
Sbjct: 28  AAETLRIGYQKYGTLV-------LLKAKGTLEKRLAAQG------VNVQWTEFPGGPQLL 74

Query: 80  NEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGSGNGIVVPAASSVQSL 139
             +  G +DFG   + P  F   A  D       + V       +   I+VP  S ++S+
Sbjct: 75  EGLNVGSIDFGVTGETPPVFAQAAGAD------LLYVAYEPPAPTSEAILVPKDSPIKSV 128

Query: 140 AELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIAGSALRSNRIEAHADF 199
           AELKGK + +   S  H +L+RA+   G     DV+ +   P  A +A     ++A   +
Sbjct: 129 AELKGKKVVLNKGSNVHYLLVRALEDAGL-KYTDVQAVFLPPADARAAFERGSVDAWVIW 187

Query: 200 VPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPEVVTAYLRASLEADRLIAA 259
            P+      +  AR + DG    A      L    YA+++PEV+ A +           A
Sbjct: 188 DPYQAAAEKQLQARTLRDGT-GIADNHQFYLATKPYAQQHPEVIKALVEEVRAVGEWSKA 246

Query: 260 QPEKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKPEY---RQAVATSIDTLKLLKK 315
            P++ +E +  + G+ A++        G     LT  PE    +Q +A S   LKL+ K
Sbjct: 247 NPQEVTEQVAPLLGLPADITLTSVKRQGYGALFLT--PEVVAAQQKIADSFYQLKLIPK 303