Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 26/227 (11%)

Query: 2   RLVATVAGLA-LALTGLNA-SAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGK 59
           R + ++ GLA LAL+G +A +AE + + +G Q  +        ++ EL          G+
Sbjct: 5   RTLLSLLGLASLALSGTSAGAAEPLTLTVGDQFFS------NRIVLELS---------GE 49

Query: 60  YKDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSG 119
            KD  Y++++K F +G+P+ + + +G LD G + D P     V  L A    + +     
Sbjct: 50  LKDLPYKIDFKRFNTGSPVASAVASGALDVGIVGDTP-----VISLAANGAPVKV---VA 101

Query: 120 SVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQ 179
           S   S +G+ + A   + S+A+L+GKT+++   S +  +  +A+   G  P+  V     
Sbjct: 102 STQTSLDGVGIVARKGIHSVADLRGKTVAIWNGSWSQQLAYKALDEAG-VPRSSVNFKYL 160

Query: 180 APEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTF 226
            P  A  AL    I+A   + P+  L    G           +APT+
Sbjct: 161 LPAEASLALTQGDIDAFGTWEPYVSLQEKEGSTLIRNAKGLMSAPTY 207