Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 74/274 (27%), Positives = 118/274 (43%), Gaps = 22/274 (8%)

Query: 2   RLVATVAGLALALTGLNASA-ETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKY 60
           R +A VAGL      ++A A ET+RI      T I       L++  G L+K L  D   
Sbjct: 5   RPLAAVAGLLAFSVAVSAEAQETVRIGYQKSSTLIT------LLKTQGTLEKALKADN-- 56

Query: 61  KDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGS 120
                 V W  F SG PL   +  G +D  A  D   +    A     K + F       
Sbjct: 57  ----IDVSWHEFPSGLPLLEALNVGNVDISA--DVADTVPIFAQAAQAKLTYFAQEAPSP 110

Query: 121 VHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQA 180
              S   IVV   S +Q LA+LKGK I+V  A+  H +L+ A+A  G +   D+     +
Sbjct: 111 ---SAQAIVVRKDSPIQQLADLKGKKIAVTKAAGTHYLLIAALAQTGLE-FSDITPAYLS 166

Query: 181 PEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGA-QANAPTFHGALVDADYAKKY 239
           P    +A  +N+++A   + PF      +   R + DGA  A+   ++  L    YAK +
Sbjct: 167 PADGRAAFENNKVDAWVTWEPFLTSVQRQLPTRTLADGAGLASYKRYY--LTGTPYAKAH 224

Query: 240 PEVVTAYLRASLEADRLIAAQPEKYSELIEKVTG 273
           P+V+        +  + +   P+  ++++  + G
Sbjct: 225 PDVLKVVYAQLEKTGQWVKTHPQDAAKVLGPLWG 258