Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 42  LLIRELGLLDKYLPHDGKYKDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNG 101
           +L+++ G L++ L      K   + V W  F++G  L + + AG +D  A  D   +F  
Sbjct: 37  ILLKQNGHLEQRL------KPLGFTVNWHEFSTG--LLSSLNAGSVDLHA--DVADAFAL 86

Query: 102 VAHLDAGKRSLFISVLSGSVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLR 161
                    + +    S S   S   I+V   S + S+A+LKGKT++V   S +H +L+ 
Sbjct: 87  FTQAADAPLTYYAQENSSS---SAQAIIVQDQSPIHSIADLKGKTVAVSKGSGSHYLLIS 143

Query: 162 AVAAQGWDPQKDVRIIAQAPEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQA 221
           A+   G           +AP+  G+A  +  ++A   + PF          R I DG   
Sbjct: 144 ALRKAGLTLADITPRYLEAPD-GGAAFANGSVDAWVIWDPFLATQQLDHHVRVIADGKDG 202

Query: 222 NAPTFHGALVDADYAKKYPEVVTAYLRASLEADRLIAAQPEKYSELIEKVTG 273
            A      +    +AK +P+V+        E  + + A P++ +E++  + G
Sbjct: 203 LADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQWVKAHPKEAAEILGPLWG 254