Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 364 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 88/360 (24%), Positives = 155/360 (43%), Gaps = 46/360 (12%)

Query: 1   MRLVATVAGLALALTGLNASAETIRIAI----GTQDTTINCATGGLLIRELGLLDKYLPH 56
           +RL A   GLALA +  +A+ +TIRI +    G    T   + GG+      L       
Sbjct: 11  LRLWAAALGLALAASA-HAAPDTIRIGVASAGGGDPLTFGGSPGGVARTNSWL------- 62

Query: 57  DGKYKDATYQVEWKNFTSGAPLTNEMVAGK-LDFGAMADFP---GSFNGVAHLDAGKRSL 112
           + ++K +  ++EW  F    P  NE ++ K +DF    D P   G  NG+       + L
Sbjct: 63  EEEFKSSGIKIEWLFFKGAGPAVNEALSNKQIDFAYQGDLPQIVGRSNGLK-----TKLL 117

Query: 113 FISVLSGSVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQK 172
            +S    +++     +V P  S +QS+ +LKG+ +S+   +  H + +  +A  G   ++
Sbjct: 118 MVSGARNNLY-----LVAPPKSDIQSVKDLKGRNVSIFRGTNGHLVAINVLAESGL-TER 171

Query: 173 DVRIIAQAPEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTF---HGA 229
           D++ +      A +AL SN ++A      + ++  + G A+ +Y   Q   P        
Sbjct: 172 DIKGVNLDAGSAQAALVSNGVDAAFGGYEWFKV-RDSGLAKVVY-STQGKDPALTRQASL 229

Query: 230 LVDADYAKKYP----EVVTAYLRA----SLEADRLIAAQPEKYSELIEKVTGIEAEVNYL 281
           LV +++ +  P     VV  ++RA    S E +R      E +       T + +     
Sbjct: 230 LVRSEFEQANPAEVQRVVDVFVRAAHWSSEEKNR-----DELFRLWARSGTPVASWAAEF 284

Query: 282 FHGPLGLQTRDLTWKPEYRQAVATSIDTLKLLKKTDRGLDTGKFIDDQYIRAAFKEAGLD 341
              PL ++   L       +  A   D LK LK   R +    + D  Y++AA K+ GL+
Sbjct: 285 DQQPLAIRNSPLVDDFIVARYKAVVADALK-LKLIRREVSIDDWFDTHYLKAALKKQGLE 343