Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 34/322 (10%)

Query: 2   RLVATVAG-LALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKY 60
           RL+  VA  +AL      A A   +  IG Q   +       L++  G L+K L   G  
Sbjct: 10  RLIQGVAAAVALPSFAALAQAPARQFRIGNQKGYLT------LLKGRGTLEKRLAPLG-- 61

Query: 61  KDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGS 120
                 V+W  FT+G      +  G +DFG + + P  F   A    G    ++      
Sbjct: 62  ----VSVKWTEFTAGPVQLEALNVGSIDFGDVGEAPPIFAQAA----GAPLAYVGATV-- 111

Query: 121 VHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQA 180
           V      ++VP AS+++++AELKGK I++   S  H  +++     G     D+ ++   
Sbjct: 112 VRPQSEAVLVPKASAIKTVAELKGKKIALNKGSNVHYFIVKLFEKHGLS-YADLNLVYLP 170

Query: 181 PEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYD--GAQANAPTFHGALVDADYAKK 238
           P  A +A     ++A   + PF         AR + D  G   N   +  +L   DY  K
Sbjct: 171 PADARAAFEKGSVDAWVIWDPFLAAAEKSLDARILADATGVVGNRAYYFSSL---DYVAK 227

Query: 239 YPEVVTAYLRASLEADRLIAAQPEKYSELIEKVTGI-----EAEVNYLFHGPLGLQTRDL 293
             +V+   +    + D   AA   + +  +  + G+     E  VN   +G   +    L
Sbjct: 228 NADVLAIAIEELNKIDVWGAANKAELAGELAALWGLPKPVAELSVNRSAYGTTPITKAIL 287

Query: 294 TWKPEYRQAVATSIDTLKLLKK 315
                 +Q +A +   LKL+ K
Sbjct: 288 A----EQQKIADTFFDLKLIPK 305