Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 73.9 bits (180), Expect = 7e-18
 Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 43/312 (13%)

Query: 6   TVAGLALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDATY 65
           TVA +AL L G  +++E + + IG Q                G +   L      +D  Y
Sbjct: 9   TVA-VALLLAGHASASERLTLRIGDQK---------------GNMRAQLEAADALRDLPY 52

Query: 66  QVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGSG 125
            + W  F + APL   + AG +D G + D P  F     L +G     I+V     +G+ 
Sbjct: 53  DIRWAEFPAAAPLAEALNAGAIDAGIIGDAPLLF----VLASGAPVKAIAVDKSDPYGT- 107

Query: 126 NGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIAG 185
             ++V   + ++S AELKGK I+    S  H + L+A+A  G   +KDV      P  A 
Sbjct: 108 -ALLVRPEAPLRSAAELKGKRIATGRGSIGHHLALKALAQAGL-TEKDVEFRFLGPVDAK 165

Query: 186 SALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPEVVTA 245
            AL +  ++A + + P+  L    G  R + +G      T +  L   D A + P     
Sbjct: 166 IALANGSVDAWSTWEPYTALAELSGQGRVLVNG--RGLSTGNSFLAATDKALEEPG---- 219

Query: 246 YLRASLE--ADRLIAAQP------EKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKP 297
             RA+L+   +RL AAQ       + YS+ +  + G   E        L  + R L W+ 
Sbjct: 220 -RRAALQDYLNRLAAAQVWANQHLDTYSKTLAAIIGFPVEA-----ARLQFERRQLRWQV 273

Query: 298 EYRQAVATSIDT 309
              Q V    DT
Sbjct: 274 IDTQTVTEQQDT 285