Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 469 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  373 bits (958), Expect = e-108
 Identities = 203/464 (43%), Positives = 287/464 (61%), Gaps = 9/464 (1%)

Query: 1   MRLVATVAGLALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKY 60
           +R         LALT    + +T+ I IGTQDTT N  T G +IREL LLDKYLP  GKY
Sbjct: 3   LRTALLTGAAILALTAPAQAGQTLTIGIGTQDTTTNTVTAGAVIRELKLLDKYLPKTGKY 62

Query: 61  KDATYQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVA-HLDAGKRSLFISVLSG 119
            D T +++W+NFTSG P+TN M+AGKL FGAM D+P   NG     +   +S  ISV + 
Sbjct: 63  ADITVKLDWQNFTSGPPVTNGMMAGKLQFGAMGDYPLVVNGYTFQSNPDAKSQLISVAAY 122

Query: 120 SVHGSGNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQ 179
           +++GSGNG+VV   S    L++LKGK +SVPF S AHGMLL+ +  +GW      ++++Q
Sbjct: 123 NINGSGNGLVVHKDSPYYELSDLKGKVVSVPFGSAAHGMLLKTMQDKGWGADY-WKLVSQ 181

Query: 180 APEIAGSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKY 239
           +PE+  + L+  +I+AHADFVPFAEL P RGFARKIYDG ++ A T+HG +V  D+A+KY
Sbjct: 182 SPEVGATNLQEKKIDAHADFVPFAELLPFRGFARKIYDGVESGAATWHGVVVRTDFAEKY 241

Query: 240 PEVVTAYLRASLEADRLIAAQPEKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKPEY 299
           PE+V AYL+A +EA++ I A P++ +E I K TGI+ EV Y+F GP G+ T D T KP  
Sbjct: 242 PEIVVAYLKAQIEAEQWIKADPKRAAEQIAKWTGIDKEVVYIFLGPGGIMTVDPTIKP-- 299

Query: 300 RQAVATSIDTLKLLKKTDR--GLDTGKFIDDQYIRAAFKEAGLDYDKALKDYDVLPLKAD 357
              VA + D  ++L+K DR    D  K+++D YIR A+ E GL+Y+  L       ++  
Sbjct: 300 -ALVADAADDARVLQKLDRIKDFDVAKWVNDSYIRKAYAELGLNYEGQLSSLTNYEVRGH 358

Query: 358 DALTGQPITDFSRLAQIWVRGEDKVRHYTSPEAALGALAQLEQEGKDIRAIYAQAADSGI 417
           D+     I +  +  QIW+   D +  Y+SP+  L A   L+++G+ ++  Y      GI
Sbjct: 359 DSFCKTAIAEPRKAGQIWIENGD-IAAYSSPKCTLAAFNDLKRKGQKVKVAYLYDTTLGI 417

Query: 418 KLLANQAWFVRNGK-GELAAFLLKDQAEQYAKAHGGEALDFVSA 460
           KL A+QA++    K G+   FL+K  AE +A   GG+   F  A
Sbjct: 418 KLFADQAFYAIPPKGGDATPFLVKKDAEAHAARIGGKVAGFDEA 461