Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 76/333 (22%), Positives = 136/333 (40%), Gaps = 35/333 (10%)

Query: 5   ATVAGLALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDAT 64
           AT    A  L   +A+AET+ I            +  LL ++ G +D+     G  KD  
Sbjct: 10  ATALVAAALLWAGSAAAETVNIGF----MPFVPYSAILLAKQKGWVDEEFTKAG-LKDV- 63

Query: 65  YQVEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGS 124
            +++W  F  G P+     +G LD  A+ D P        +D    + F+ +        
Sbjct: 64  -EIKWHQFAGGPPVNEAFASGALDIAALGDTPSLIAFANGID----TRFVGLACKG--AK 116

Query: 125 GNGIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIA 184
              ++V   SSV+++ +LKGK ++       H +L+  +A  G     DV  +    +  
Sbjct: 117 AEALIVLKDSSVKTVKDLKGKKVATLRGGNVHELLVLVLAEAGL-KISDVEFLNLGLQDM 175

Query: 185 GSALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPEVVT 244
           G AL    ++A   + P      + G +R + DGA   +   +  +    +A K+P+V+ 
Sbjct: 176 GIALTKGDVDAVLVWEPLLTKLDSEGVSRTLRDGAGLKS-NLNPIVALGSFAAKHPDVLK 234

Query: 245 AYLRASLEADRLIAAQPEKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKPEYRQA-V 303
           AYL+A       + + P   ++++  V G+  +   L             WKP   +A  
Sbjct: 235 AYLQAVKRGAEALRSDPAGSAQVLAPVVGLTPKQTELAFS-------RFEWKPTVTEADQ 287

Query: 304 ATSIDTLKLLKKTDRGLDTGKFIDDQYIRAAFK 336
           A   D++K L            +D+ +IR  F+
Sbjct: 288 AELADSVKFL------------LDNHFIRQTFE 308