Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 317 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 8e-22
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 22/276 (7%)

Query: 7   VAGLALALTGLNASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDATYQ 66
           +A +AL++    A A    + IG Q T +      ++ R+ G+++K L   G       +
Sbjct: 14  IAAVALSVLPFAAQAAE-ELKIGYQKTGLP-----VIARQQGVIEKALEAKG------VK 61

Query: 67  VEWKNFTSGAPLTNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGSGN 126
           V W  FT+G PL   +  G ++ G   D P  F   A    G   ++++ L  +  G G 
Sbjct: 62  VSWVEFTAGPPLVEALNVGSINVGWTGDAPPIFGQAA----GSAIVYVAALPSN--GKGE 115

Query: 127 GIVVPAASSVQSLAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIAGS 186
            I     S ++S+A+LKGK + V   ++AH +L+ A+   G     D+ +   +P  A +
Sbjct: 116 AIFTKPESGIKSVADLKGKKVGVGKGTSAHNLLVAALEKNGL-KLSDIDVTYLSPADAAA 174

Query: 187 ALRSNRIEAHADFVPFAELFPNRGFARKIYDGAQA-NAPTFHGALVDADYAKKYPEVVTA 245
           A  S++I+A A + PF  +   R     +   +   +  T+   L + DYAK + + +  
Sbjct: 175 AFASDKIDAWAVWDPFYAIAETRYKPVTLARTSDVLDVKTYF--LANRDYAKSHADTINT 232

Query: 246 YLRASLEADRLIAAQPEKYSELIEKVTGIEAEVNYL 281
            + A  EA +  AA  +K +  + +VTG+  E   L
Sbjct: 233 NVGALGEAAKWSAANRDKVAAALHEVTGVPLEAQTL 268