Pairwise Alignments

Query, 468 a.a., putative Nitrate ABC transporter, periplasmic nitrate-binding protein from Pseudomonas putida KT2440

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 23/301 (7%)

Query: 19  ASAETIRIAIGTQDTTINCATGGLLIRELGLLDKYLPHDGKYKDATYQVEWKNFTSGAPL 78
           A A T  + IG Q   +       L +  G L+  L      KD   +V+W  F+SG PL
Sbjct: 26  AGAATTTLRIGWQKNGVIA-----LAKSQGALEALL------KDRGIEVKWSEFSSGPPL 74

Query: 79  TNEMVAGKLDFGAMADFPGSFNGVAHLDAGKRSLFISVLSGSVHGSGNGIVVPAASSVQS 138
              + AG LD G   D P  F       AG    ++     +  GS   I+V   S +++
Sbjct: 75  LEALGAGALDIGPTGDVPPLFAQA----AGGNLRYVGTYKAAAGGS--AILVQKDSPLKT 128

Query: 139 LAELKGKTISVPFASTAHGMLLRAVAAQGWDPQKDVRIIAQAPEIAGSALRSNRIEAHAD 198
           L +LKGK ++    S+AH + ++A+   G     D+  +  AP  A +A RS  I+A + 
Sbjct: 129 LEDLKGKKVAFKRGSSAHNVTVKALRKAGL-TLSDITPVDLAPPDAAAAFRSGSIDAWSI 187

Query: 199 FVPFAELFPNRGFARKIYDGAQANAPTFHGALVDADYAKKYPEVVTAYLRASLEADRLIA 258
           + P+  +       R +   A+     +   L + D+ +  P++V   L+          
Sbjct: 188 WDPYFAVAEKEPTTR-VLSTAEGIVDPWSYFLANGDFVEANPDLVPLILKELANVGAKAQ 246

Query: 259 AQPEKYSELIEKVTGIEAEVNYLFHGPLGLQTRDLTWKPE----YRQAVATSIDTLKLLK 314
           A  +  ++ +  +TG+  +V  +     G     ++  P+    Y+QA+A     LK++ 
Sbjct: 247 ANIDATAKSLAAITGVPEDVTKVSLTRPGADLGRVSLVPDEAIAYQQALADEFYDLKIVP 306

Query: 315 K 315
           K
Sbjct: 307 K 307