Pairwise Alignments

Query, 448 a.a., putative membrane bound peptidase, nefD from Pseudomonas putida KT2440

Subject, 451 a.a., Membrane-bound serine protease (ClpP class) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  108 bits (269), Expect = 5e-28
 Identities = 104/367 (28%), Positives = 161/367 (43%), Gaps = 49/367 (13%)

Query: 28  VWVLNIDDAIGPASADYLVRSLGQAQAQGAQLVVIRMDTPGGLDSAMRQMIKAILSSTVP 87
           V+VL I D I P     +  +L  A A  A ++VI MDT GG  +    +   +L ST+P
Sbjct: 31  VYVLEIQDNIDPRMNRKVKMALEDAHAADADILVIHMDTYGGAVNDADDIRTMLLESTIP 90

Query: 88  VASYVAPSGARAASAGTYILYASHIAAMAPGTNLGAATPVRIGGAPGTPSDDKAKGGDDE 147
             S++      AASAG  I  A     MAPG ++GAAT V               GG  E
Sbjct: 91  TVSFIDKD---AASAGALISIACDSIYMAPGASIGAATVV--------------MGGSGE 133

Query: 148 TLARKQVNDAAAYIRGLAQMRGRNADWAEKAVREAVSL----SASEALRLNVIDQVADDL 203
               K  +   + +R  A+  GR+   AE  V E + +    +A   +  +V + + +  
Sbjct: 134 AAPDKYQSYMRSMMRSTAEANGRDPQIAEAMVDERIEIEGITTAGSVITFSVSEAIKNGF 193

Query: 204 PDL-LRKLDGKTLQVAGQPRQLQTAGASVVEHLPDWRTRFLAVITNPSVALILIMIGVYG 262
            +   R +D           +L     S VEH+       +++  NP+++  LI+I + G
Sbjct: 194 CEAEARSIDDAVKHFGITDYELIEYEMSTVEHI-------ISIFLNPAISGFLILIIIGG 246

Query: 263 LLFEFMNPGSAVGGVVGGICLLLALYALQLLPVSFAGVA------LILLGITFMIAEAF- 315
           + FE   PG  VG  +      + LY    +P    G+A      +  LGI  +  E F 
Sbjct: 247 IYFEIQTPG--VGFPLAAAITAVILY---FIPYYLTGLAENWEIIVFALGIILLALELFV 301

Query: 316 LPSFGVVGFGGIVAFVVG-ALILIDTDA------PGFGIPLALIGTLALLSALLIGGVLG 368
           +P FGV G  GI   + G  L ++  DA      P   + +AL+ T+ L S + IGG+  
Sbjct: 302 IPGFGVAGILGIACILAGLTLGMLPNDAFDFSFVPSEELFVALV-TVILASVVAIGGIFF 360

Query: 369 MALKARQ 375
           +A K  +
Sbjct: 361 LAPKVNE 367