Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 471 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 4e-63
 Identities = 153/461 (33%), Positives = 232/461 (50%), Gaps = 11/461 (2%)

Query: 9   LCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRLNEL 68
           L L+L AC  VGPDY+     A      N     DA     A     WWQ ++D  LN+L
Sbjct: 11  LVLALSACA-VGPDYKTQTPEAA-----NITAAADAKQYDHAKFEGIWWQQFEDPTLNQL 64

Query: 69  VRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAFLQPEKVPV 128
           V QAL  N +LRVA A +  ARA  + A +       +   A      G+   Q  K   
Sbjct: 65  VTQALQGNRDLRVAFARLRAARAIRDDASNDA--MPTITSRASSDLAKGQIPGQTTKRVN 122

Query: 129 ANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQVCSAN 188
           +   +  +  +++ DL+G  +R  EA  A+  A +A     ++T++A++V AY Q+  A 
Sbjct: 123 SERYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQLRGAQ 182

Query: 189 EEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERETGMY 248
               IA ++L  Q++S  +   LRDAG GD+  V R+  +  ++ A +P+ +AE+     
Sbjct: 183 LRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQVRERN 242

Query: 249 TLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAATAYIG 308
            +A LL +  D+L         LP + + +P+GD   LL+RRPD+  AER+LAAATA IG
Sbjct: 243 RIATLLGQRPDKLSVDLGP-KNLPAIAKALPIGDPGQLLQRRPDILSAERKLAAATARIG 301

Query: 309 VATGALYPDISIGAQVG-TIGILENLGEPSTNRWGFGPQISW-SIPTNGTRARIRMAEAS 366
           VA   L+P +S+   +G T G    +G  + N W  GP I+W +      RAR+R A+A 
Sbjct: 302 VAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGADAE 361

Query: 367 TQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQAGRES 426
              ALA ++  VL A+ E++   + Y     R  +L    +S++ AAD     Y+ G   
Sbjct: 362 ADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYREGTVD 421

Query: 427 FLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
           FL  L A R         A A   + +G +A++ ALGGGW+
Sbjct: 422 FLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWQ 462