Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  171 bits (432), Expect = 7e-47
 Identities = 137/473 (28%), Positives = 229/473 (48%), Gaps = 25/473 (5%)

Query: 8   GLCLSLGACMMVGPDYEVPG--DAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRL 65
           GL L L AC  +GPDY+ P   + A  +          +DS+        WW+LY D++L
Sbjct: 48  GLALLLSACA-IGPDYQRPEVVEPAQFKEAQGWRQATPSDSLARGA----WWELYGDRQL 102

Query: 66  NELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQES-----GEAF 120
           N+LV +  +AN  +  A A   +A+A      S+G F   V L   + + S       A 
Sbjct: 103 NDLVMRLNTANQTVAQAEARFRQAQALAR--SSRGAFYPTVDLSVGKTRASQGTGSSNAS 160

Query: 121 LQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKA 180
           L      + +   A +  S++ D+WG  +RG EA +A+A+A  A     R++  +++V++
Sbjct: 161 LSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQS 220

Query: 181 YTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFK 240
           Y Q+   +E+  + + +L+  ++S+++ +    AG   +  V ++QTQ K+ +A L    
Sbjct: 221 YLQLRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLI 280

Query: 241 AERETGMYTLAALLAK-PVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQ 299
            +R      +A L+ + P +   A + D   LP     +PV   + LL+RRPD+  AER 
Sbjct: 281 WQRAQLENAIAVLIGEAPANFNLAVSKDIPALPQ----IPVSLPSQLLERRPDIASAERS 336

Query: 300 LAAATAYIGVATGALYPDISIGAQVGTIGILENLGEPSTNR-WGFGPQISWSIPTNGTR- 357
           + AA A IGVA  A YPD+S+    G             NR W  GP+++ ++   G R 
Sbjct: 337 VIAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRS 396

Query: 358 ARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTH 417
           A +    AS    +A +   VL+  RE +  + Q   L D      EA ++A+E+   T 
Sbjct: 397 AEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLRLTQ 456

Query: 418 RYYQAGRESFL--ADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWKG 468
             Y+AG  ++L    +QAT   ++ R  L    +++    + +  ALGGGW G
Sbjct: 457 NQYKAGLIAYLDVVTVQAT-ALSNERTVLTLLQTRLV-ASVQLIAALGGGWDG 507