Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  163 bits (412), Expect = 1e-44
 Identities = 142/481 (29%), Positives = 216/481 (44%), Gaps = 28/481 (5%)

Query: 4   LILAGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQ 63
           L LA     L  C ++ PDY+ P +A V      GP    A +   A   + W Q + D 
Sbjct: 6   LSLAVTAFVLSGCSLI-PDYQRP-EAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDP 63

Query: 64  RLNELVRQALSANTELRVAAANIAKARAQVEV-------AESQGGFNGGVKLGAQRLQES 116
            L +L++ AL  N +LRVAA NI    AQ ++       A S  G +G       RL ++
Sbjct: 64  ALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATG-SGSRSRTPARLSQT 122

Query: 117 GEAFLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVAD 176
           GE+ +  +      I      +SY+ DL+G  +  +E A     A + A  + +I+LVA 
Sbjct: 123 GESTISSQYSAGLGI------SSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVAS 176

Query: 177 VVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAEL 236
           V  AY    +  E   + +++LD  EQS KL  R  + G      +++S+T  ++ R  L
Sbjct: 177 VANAYLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVAL 236

Query: 237 PRFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQA 296
            R+  +      +L  LL      LPA          L   VP G  + LL+RRPD+ QA
Sbjct: 237 ARYTRQVAQDENSLTLLLG---TGLPANITSKPLSDDLLSEVPAGLPSDLLQRRPDIVQA 293

Query: 297 ERQLAAATAYIGVATGALYPDISIGAQVGTIG-ILENLGEPSTNRWGFGPQISWSIPTNG 355
           E  L AA A IG A  A +P I++ A  GT    L  L +  +  W F PQI+  I   G
Sbjct: 294 EYNLKAANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAG 353

Query: 356 T-RARIRMAEASTQAALAHFDGVVLNAIRETQTRLA---QYSALLDRRDALAEAEKSAKE 411
           + RA +  ++   +  +A+++  +    +E    LA    Y   LD +     A +    
Sbjct: 354 SLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYR 413

Query: 412 AADQTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGW-KGTA 470
            A+   R Y+ G +S L  L A R     +  L          ++ ++ ALGGGW + TA
Sbjct: 414 LAE---RRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTA 470

Query: 471 K 471
           K
Sbjct: 471 K 471