Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 481 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  207 bits (526), Expect = 8e-58
 Identities = 138/463 (29%), Positives = 231/463 (49%), Gaps = 9/463 (1%)

Query: 11  LSLGACMMVGPDYEVP-GDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRLNELV 69
           +SL AC  VGPD++ P G    Q ++  G  RQ A   V+ P+ E WW ++ D++L+ L 
Sbjct: 12  ISLSACT-VGPDFQRPQGPQVTQWSEPQG--RQAASRAVNDPLQERWWDVFHDEQLSALT 68

Query: 70  RQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAFLQPEKV--- 126
           R+AL+ N +L++A++ + ++RA  +V  ++   N       QR + SG+    P      
Sbjct: 69  RRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSDPSGNNGR 128

Query: 127 PVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQVCS 186
              N  +   SAS++ D WG  KR TEAA A     +       ++++A+  + Y Q+  
Sbjct: 129 SAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQNYIQLRG 188

Query: 187 ANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERETG 246
                 +  ++LD+   S+KL+Q     G   +  V  +  Q  ++ A LP  +  ++  
Sbjct: 189 VQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQRQDQL 248

Query: 247 MYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAATAY 306
           +  L+ L+ +P   L A  +  A +P   + V +G  + L +RRPD+RQAE +L AATA 
Sbjct: 249 INALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDIRQAEARLHAATAS 308

Query: 307 IGVATGALYPDISIGAQVGTIGI-LENLGEPSTNRWGFGPQISWSIPTNG-TRARIRMAE 364
           IGVA G  YP I++   +G+  + L + G   +  + FGPQ S  +   G  +  + + E
Sbjct: 309 IGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRLQGMLNLRE 368

Query: 365 ASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQAGR 424
           A  Q A   +   VL A  E   +L +Y+A   RRD+LAEA +  + A     + Y  G 
Sbjct: 369 AQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQQYVEGV 428

Query: 425 ESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
             F+  L         + Q   +++ V+   + ++ ALGGGW+
Sbjct: 429 VDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGWE 471