Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 492 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

 Score =  344 bits (883), Expect = 3e-99
 Identities = 196/462 (42%), Positives = 269/462 (58%), Gaps = 12/462 (2%)

Query: 12  SLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRLNELVRQ 71
           +L AC  VGPDY  P +A   ++    P  +   +  +AP+P  WW+LY D  L++LV Q
Sbjct: 19  ALAACAAVGPDYRQPPEALASQSAAGKPFAEAPAN--AAPLPPHWWRLYHDPLLDKLVEQ 76

Query: 72  ALSANTELRVAAANIAKARA-QVEVAESQG---GFNGGVKLGAQRLQESGEAFLQPEKVP 127
           AL+ NT+LR A AN+ + RA + EVA ++    G NGG   G      SG + LQ    P
Sbjct: 77  ALAHNTDLRQAVANLERERAIEDEVAGAKYPSIGVNGGPSYG----HVSGLSLLQKGYEP 132

Query: 128 VANIG-EAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQVCS 186
                  A  S SYQ DL+G  +R  EA++A+  A +AA D  R+ + A   +AY + CS
Sbjct: 133 PNTFNYSAGASLSYQVDLFGQIRRAIEASQASTQAAEAALDLVRVNVAAGTARAYAEACS 192

Query: 187 ANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERETG 246
                 IA++S+ LQ+ +V +  RL+ AGR       R++ Q + L A LP  KAER+  
Sbjct: 193 TGLRLRIAQKSVSLQQDAVNVTDRLQRAGRAGAIDAGRARAQLQQLNAALPPLKAERQGA 252

Query: 247 MYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAATAY 306
           +Y LA L        P   ADC+E P +   +PVGDGAALL+RRPD+RQAER LAA+TA 
Sbjct: 253 LYRLATLTGALPQDFPREVADCSEPPRVAGTLPVGDGAALLRRRPDIRQAERSLAASTAR 312

Query: 307 IGVATGALYPDISIGAQVGTIGILENLGEPSTNRWGFGPQISWSIPTNG-TRARIRMAEA 365
           IGVAT  LYP I++G    ++G  +  G   T  W  GP ISW++P  G  ++ I  AEA
Sbjct: 313 IGVATADLYPKITLGLSGSSVGHADGFGRKDTFAWSLGPLISWTVPNTGVVQSHIAQAEA 372

Query: 366 STQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQAGRE 425
            T+AALA FDG VL A+RET+T LA Y+  LDRR AL  +   + + A Q  + YQ GR 
Sbjct: 373 GTRAALAKFDGTVLTALRETETALATYARELDRRAALQASRDESAKVAAQARQLYQNGRT 432

Query: 426 SFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
            +L  L A R+     A LAA+ +Q++  QI +F+ALGGGW+
Sbjct: 433 GYLDSLDAERSLAASEAALAASEAQLSDDQIVLFMALGGGWE 474