Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 477 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  177 bits (449), Expect = 7e-49
 Identities = 142/483 (29%), Positives = 220/483 (45%), Gaps = 31/483 (6%)

Query: 1   MKQLILAGLCLS-LGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPED--WW 57
           ++ L L+ +  + L  C+ + P+Y  P     Q    +G         V AP P D  W 
Sbjct: 8   LRSLALSAMASAVLAGCVNLAPEYTAPASPVPQALPSSG---------VEAPTPIDVSWR 58

Query: 58  QLYQDQRLNELVRQALSANTELRVAAANIAKARAQVEVAES------QGGFNGGVKLGAQ 111
             + + RL   +  AL+ N +LRVAA NI +ARAQ  +A +      + G  G       
Sbjct: 59  SFFVEPRLRGTIELALANNRDLRVAALNIERARAQYGIARASLFPTVEAGAGGSRSRTPG 118

Query: 112 RLQESGEAFLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARI 171
            L   GEA +  +    A++G      SY+ DL+G  +   E+A  +    +    + +I
Sbjct: 119 SLSTGGEARIGSQYS--ADLG----LTSYEIDLFGRVRNLGESALQSYFQTEETRRSTQI 172

Query: 172 TLVADVVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKS 231
           +L+A V  A+ Q+ +  +   +AR +L+ Q +S  L QR    G      + ++Q+   S
Sbjct: 173 SLIASVATAWLQLAADEQRLLLARNTLESQRKSFDLVQRSHRLGAQSGLALAQAQSTVDS 232

Query: 232 LRAELPRFKAERETGMYTLAALLAK--PVDQLPAGTADCAELPH--LNQLVPVGD-GAAL 286
            RA+   F ++ E     LA L+    P D LPA  A     P      LVP  D  +++
Sbjct: 233 ARADAAAFDSQVEQDRNALALLVGAMPPADLLPAAPASDTAAPADAARLLVPPPDLPSSV 292

Query: 287 LKRRPDVRQAERQLAAATAYIGVATGALYPDISIGAQVGTIG-ILENLGEPSTNRWGFGP 345
           L RRPDVR AE  L A+ A IG A  A +P I++ A  GT    L  L    +  W F P
Sbjct: 293 LNRRPDVRAAEHALRASNADIGAARAAFFPRIALTASAGTASSTLSGLFAGGSQAWSFAP 352

Query: 346 QISWSIPTNGT-RARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAE 404
            IS  I   G  RA +R+AEA  +  +A ++  V  A RE    LA+   L +R DA   
Sbjct: 353 SISVPIFDGGANRANLRVAEAQQKIQIATYEKAVQTAFREVADALAERRTLAERLDAQRS 412

Query: 405 AEKSAKEAADQTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGG 464
              +   + + +   +++G  S+L  L A R Y   +  L          ++ ++  LGG
Sbjct: 413 LLGATSRSFELSQSLFRSGASSYLDVLDAQRAYYAAQQALIGLQLTEQTNRLTIYKTLGG 472

Query: 465 GWK 467
           GW+
Sbjct: 473 GWE 475