Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 487 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

 Score =  316 bits (810), Expect = 1e-90
 Identities = 189/455 (41%), Positives = 249/455 (54%), Gaps = 10/455 (2%)

Query: 19  VGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRLNELVRQALSANTE 78
           VGPD+  P   +  +    GP    A +   A +P  WW LYQD  L+ LV QA + NT+
Sbjct: 25  VGPDHVAPATLSPAQAASAGPFLSAAGNATDADLPPSWWHLYQDPLLDALVDQAFAHNTD 84

Query: 79  LRVAAANIAKARA-QVEVAESQG---GFNGGVKLGAQRLQESGEAFLQPEKVPVANIGE- 133
           LR A A+  + +A + EV  SQ      NGG   G      SG   +Q +  P       
Sbjct: 85  LRQAIASFEREQALEAEVRGSQRPTVALNGGPGFG----HVSGLTLVQRDYEPPGRFTYG 140

Query: 134 AIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQVCSANEEYHI 193
           A  + SYQ DL+G   R  EAA+A + A QAA D  R+ +     +AY +VC+       
Sbjct: 141 AGANLSYQLDLFGQLHRAIEAAEAGSGAAQAAVDLVRVNVAGGTARAYAEVCTTGLRLRS 200

Query: 194 ARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERETGMYTLAAL 253
           A  S+ LQE++V+L QRL+ AG+       R++ Q + LRA LP  +A+R+  +Y LA L
Sbjct: 201 AHASVRLQEEAVQLAQRLQQAGKVGTIDTARARGQLELLRASLPPLQAQRQNALYRLATL 260

Query: 254 LAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAATAYIGVATGA 313
                   PA  A C   P     +PVGDGA+LL+RRPDVRQAER LAAATA IGVAT  
Sbjct: 261 TGAAPRDFPAQVAGCERPPRTAAPLPVGDGASLLRRRPDVRQAERSLAAATARIGVATAE 320

Query: 314 LYPDISIGAQVGTIGILENLGEPSTNRWGFGPQISWSIPTNG-TRARIRMAEASTQAALA 372
           LYP + +G   G+ G L   G   +  +  GP ISW++PTNG  RARI  AEA+T+ A A
Sbjct: 321 LYPKVVLGLSAGSAGFLNRFGNRESLSYSLGPLISWTLPTNGVARARIAQAEAATRQAAA 380

Query: 373 HFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQAGRESFLADLQ 432
            FD  VL A+RE +  L  Y+  LDR  ALA A   +   A Q    Y  G+ + L  L 
Sbjct: 381 RFDATVLTALREAEIALESYARELDRHAALAAARDQSAAVARQARTLYVNGKTAQLDALD 440

Query: 433 ATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
           A RT     A LAA+ +Q+A  Q+AVF+ALGGGW+
Sbjct: 441 AMRTLAASEAALAASQAQLADDQLAVFMALGGGWE 475