Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  221 bits (562), Expect = 5e-62
 Identities = 147/473 (31%), Positives = 237/473 (50%), Gaps = 19/473 (4%)

Query: 1   MKQLILAGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLY 60
           +K L  + L L+L AC  VGPDY+ P     Q +        D     S      WW+ +
Sbjct: 4   LKPLTPSLLALALAACA-VGPDYQAPATEPAQLSSDVQAKAYDRSRFESL-----WWKQF 57

Query: 61  QDQRLNELVRQALSANTELRVAAANIAKARAQVEVAESQG----GFNGGVKLGAQRLQES 116
            D  LN+LV+ +L  N +LRVA A +  AR+  E AE+             LG  ++   
Sbjct: 58  DDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQ 117

Query: 117 GEAFLQPEKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVAD 176
               +  E+  +       +  +++ DL+G  +R  EA++A      A     +++L+A+
Sbjct: 118 TTERVNSERYDLG------LDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAE 171

Query: 177 VVKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAEL 236
           +V AY Q+  A     IA  +L  Q++S  + + LRDAG G++  V R+  +   + A +
Sbjct: 172 LVDAYGQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATV 231

Query: 237 PRFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQA 296
           P+ +AE+    + +A LL +  D L    +  A LP + + +PVGD   LL+RRPD+R A
Sbjct: 232 PQLQAEQARARHRIATLLGQRPDALSVDLSPKA-LPAIAKALPVGDPGELLRRRPDIRSA 290

Query: 297 ERQLAAATAYIGVATGALYPDISIGAQVG-TIGILENLGEPSTNRWGFGPQISW-SIPTN 354
           ERQLAAATA +GVAT  L+P +S+   +G T      +G  + N W  GP I+W +    
Sbjct: 291 ERQLAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLG 350

Query: 355 GTRARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAAD 414
             RAR+R A+A  + ALA+++  VL A+ E+    + Y     R  +L     ++++AA+
Sbjct: 351 SVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAE 410

Query: 415 QTHRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
                Y+ G   +L  L A R         A     + +G ++++ ALGGGW+
Sbjct: 411 LASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463