Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 504 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 6e-51
 Identities = 136/470 (28%), Positives = 219/470 (46%), Gaps = 12/470 (2%)

Query: 8   GLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQRLNE 67
           GL + L  C  VGPD+E P   A   +  + P+ + A    +AP    WW ++ D  L+ 
Sbjct: 9   GLLMVLAGCTQVGPDFEKP--QAPWLDGWSTPMIEQAGRSAAAPDLRQWWAVFADSTLDA 66

Query: 68  LVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRL----QESGEAFLQP 123
           L+ +A + NT LRVA   IA+ARAQ+ + ++ G +    +L AQ L     +SG    + 
Sbjct: 67  LIAEADANNTNLRVAGLRIAEARAQLAIVQT-GRYPQLQQLSAQSLYLKQDQSGTPSARD 125

Query: 124 EKVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQ 183
                +++G  I    ++ D WG F R  E+A A   A QA    A + L A V   Y  
Sbjct: 126 SVFWQSSVGFDI---GWEIDFWGRFSRAIESADAVYFASQANYADAMLLLRAQVADTYFA 182

Query: 184 VCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAER 243
           + +A     IA+E+   Q +S+++ +RL   G  DE    +++TQ+ +  A +P F+ + 
Sbjct: 183 LRTAEARLAIAQENAKRQARSLEITERLFRHGENDELDWQQARTQYLATLATIPEFENQL 242

Query: 244 ETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAA 303
                 L +LL +P   LP   A   +LP  N+ V     A+LL+RRPD+R AE+ +AA 
Sbjct: 243 NALRNILCSLLGRPPGPLPQLEAGHGQLPLPNRAVLQDVPASLLQRRPDIRAAEQAVAAQ 302

Query: 304 TAYIGVATGALYPDISIGAQVGTIGILENLGEPSTNRWGFGPQISWSIPTNGTRAR-IRM 362
           +A +GVA   LYP +S+   +G   +  N   P T     GP + W+    G R   +R+
Sbjct: 303 SALVGVAEADLYPQLSLLGSIGWTFLSAN-HLPDTFDLAAGPSLIWNPFDYGRRKNTVRV 361

Query: 363 AEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQA 422
            +A  Q  +  +   V  A RE     +     L       +A ++A+ + +     Y+ 
Sbjct: 362 EDARLQQLIELYQQGVREAAREADDAASGLVRSLQSATIREQASQAAQRSLNLASSQYRE 421

Query: 423 GRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWKGTAKP 472
           G   F   L A +     +     +        + ++ ALGGGW  +  P
Sbjct: 422 GFADFQRVLDAQQLLLQQQDGYLVSRGNAVSSLVTLYKALGGGWDASRAP 471