Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 531 a.a., putative efflux pump outer membrane protein TtgC from Pseudomonas sp. DMC3

 Score =  202 bits (513), Expect = 3e-56
 Identities = 139/472 (29%), Positives = 229/472 (48%), Gaps = 9/472 (1%)

Query: 2   KQLILAGL-CLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLY 60
           +QL L+ L  +SL AC  VGPD++ P     Q  D   P +      VS P+ E WW+ +
Sbjct: 45  QQLTLSALLAVSLSACT-VGPDFQKPETR--QPADWAKPSQSAPSQAVSEPLNERWWETF 101

Query: 61  QDQRLNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAF 120
            D +L+ L ++AL+ N +L++A++ + ++RA  +V  ++   N        R + SG+  
Sbjct: 102 HDPQLSALTQRALNNNLDLQLASSRLQQSRAARQVITAERYPNSTASGSYGRKRNSGKGL 161

Query: 121 LQPEKV---PVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADV 177
             P         N  +A  SAS++ D WG  +R TEAA AN +  +       +T++AD 
Sbjct: 162 NDPSGNNGDEAFNFWDAGFSASWELDFWGRVRRETEAADANLEVAENDRRGVLLTVLADT 221

Query: 178 VKAYTQVCSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELP 237
            + Y Q+        +  ++LD+   S+KL+Q     G   +  V  +  Q  ++ A LP
Sbjct: 222 AQNYIQLRGVQSTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLP 281

Query: 238 RFKAERETGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAE 297
             +  +   +  ++ L+ +P   L    +  A +P     V +G  + L +RRPD+RQAE
Sbjct: 282 ALEQRQAQLINAISLLMGEPPQALAQALSTDAAVPQSPLQVAIGLPSQLAERRPDIRQAE 341

Query: 298 RQLAAATAYIGVATGALYPDISIGAQVGTIGI-LENLGEPSTNRWGFGPQISWSIPTNG- 355
            +L AATA IGVA G  YP I++   +G+  + L + G   +  +  GPQ S  +   G 
Sbjct: 342 ARLHAATANIGVAKGDFYPRITLSGNLGSQAMQLSDFGSWGSRAFAIGPQFSLPLFDGGR 401

Query: 356 TRARIRMAEASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQ 415
            R  +++ EA  Q A   +   VL A  E   +L  Y+A   RRD+LAEA    + A   
Sbjct: 402 LRGMLQLREAQQQEAAIAYQQTVLRAWHEIDDQLTAYNASQRRRDSLAEAVHQNQIALRT 461

Query: 416 THRYYQAGRESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
             + Y  G   F+  L         + Q   +++ V+   + ++ ALGGGW+
Sbjct: 462 AQQQYVEGVVDFVNVLTVQSALLATQEQWVESSTGVSLAMVGLYKALGGGWQ 513