Pairwise Alignments

Query, 472 a.a., putative efflux transporter from Pseudomonas putida KT2440

Subject, 480 a.a., Outer membrane protein OprM from Pseudomonas sp. DMC3

 Score =  703 bits (1815), Expect = 0.0
 Identities = 352/463 (76%), Positives = 408/463 (88%)

Query: 5   ILAGLCLSLGACMMVGPDYEVPGDAAVQRNDLNGPLRQDADSVVSAPVPEDWWQLYQDQR 64
           ++AGL + L AC MVGPDY+VP DAAVQR D+ G L      VVSAPVP DWW+LY+D R
Sbjct: 6   LIAGLGVMLSACQMVGPDYQVPTDAAVQRKDIQGELAVAGKPVVSAPVPTDWWRLYKDPR 65

Query: 65  LNELVRQALSANTELRVAAANIAKARAQVEVAESQGGFNGGVKLGAQRLQESGEAFLQPE 124
           L++LV+QA+++NT+LRVAAAN+++ARAQV+ AE+ GG++GGVK+GAQRLQESG+AFL PE
Sbjct: 66  LDQLVQQAMASNTDLRVAAANLSRARAQVDEAEAAGGWSGGVKMGAQRLQESGQAFLLPE 125

Query: 125 KVPVANIGEAIISASYQFDLWGTFKRGTEAAKANADAVQAAADTARITLVADVVKAYTQV 184
           KVPVANI +  ISASYQFDLWGT +RG EAAKANADA QAAADTARITLVADVV+AYTQV
Sbjct: 126 KVPVANIADIGISASYQFDLWGTLQRGIEAAKANADATQAAADTARITLVADVVRAYTQV 185

Query: 185 CSANEEYHIARESLDLQEQSVKLNQRLRDAGRGDETQVTRSQTQFKSLRAELPRFKAERE 244
           C+ANEE  IA  SLDLQ QS  L QRLRDAGRGDETQVTRSQTQFKSLRA+LPR++A R+
Sbjct: 186 CAANEEREIAEHSLDLQSQSTTLIQRLRDAGRGDETQVTRSQTQFKSLRADLPRYEAARQ 245

Query: 245 TGMYTLAALLAKPVDQLPAGTADCAELPHLNQLVPVGDGAALLKRRPDVRQAERQLAAAT 304
            G++ L+ LLAKPV+QLPAGTA CAELP + QLVPVGDGAALLKRRPD+RQAER+LAAAT
Sbjct: 246 AGLFRLSMLLAKPVEQLPAGTASCAELPKIAQLVPVGDGAALLKRRPDIRQAERRLAAAT 305

Query: 305 AYIGVATGALYPDISIGAQVGTIGILENLGEPSTNRWGFGPQISWSIPTNGTRARIRMAE 364
           A IG+ATG LYPDISIGA +GT+GI+++LG+PSTNRWGFGP +SW +PTNG RARIR AE
Sbjct: 306 AGIGIATGELYPDISIGATIGTVGIIDDLGDPSTNRWGFGPSLSWKVPTNGARARIREAE 365

Query: 365 ASTQAALAHFDGVVLNAIRETQTRLAQYSALLDRRDALAEAEKSAKEAADQTHRYYQAGR 424
           A+TQ ALAHFDGVVLNAIRETQT LAQYSALL RRDALAEAE+SAK AA+QTHR++QAGR
Sbjct: 366 ANTQGALAHFDGVVLNAIRETQTGLAQYSALLQRRDALAEAEQSAKLAAEQTHRFFQAGR 425

Query: 425 ESFLADLQATRTYTDMRAQLAAANSQVAQGQIAVFLALGGGWK 467
           ESFLADLQATRTYTD+ AQLAAAN+QVA  QI +FLALGGGW+
Sbjct: 426 ESFLADLQATRTYTDVTAQLAAANTQVAMSQIDLFLALGGGWE 468