Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 335 a.a., Efflux transporter periplasmic adaptor subunit from Rhodanobacter sp. FW510-T8

 Score =  238 bits (608), Expect = 1e-67
 Identities = 137/327 (41%), Positives = 198/327 (60%), Gaps = 46/327 (14%)

Query: 3   KPLLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVE 62
           KPLL   R+ +T ++V  AA+L   +  +Y+++PWTRDG +RA+V++IAPDVSGL+ +VE
Sbjct: 4   KPLLL--RLAVTGIIVIVAALLGHALWKHYLYSPWTRDGRVRAEVVRIAPDVSGLVTRVE 61

Query: 63  VRDNQTVKRGDVLFTIDQDRFTLALRQAKATLGERQETLAQA------------------ 104
           V DNQ V +GD+LF ID  RF  A+ QA+A L   + +   A                  
Sbjct: 62  VSDNQFVHKGDLLFDIDPARFRYAVGQAQANLDAAEASARAAGANIGAALASAAARKAEY 121

Query: 105 ---SREAQRNRKLGNLVAAE-------------------QLEESQSREAR--ARSAVSEA 140
              + EA R ++LG +V  E                   Q   SQ+   R  A++AV +A
Sbjct: 122 DMRAEEAARRQRLGGIVTQEERANATATANSARATWAQAQAGGSQASAVREQAQAAVEQA 181

Query: 141 QVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFEETK 200
           QVA+D A+LNL+R+ VR+PVDGY+ +   R  ++ + G P L+++DS  Y++ GYFEETK
Sbjct: 182 QVALDQARLNLERTEVRAPVDGYVTNLDIRVGDYASTGSPRLALIDSHGYYIYGYFEETK 241

Query: 201 LGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRLAQRI 260
           L  + +GD VDIR+M     L+G +   A GI DRD  +G++LL +VNP F+WVRLAQR+
Sbjct: 242 LPQLRVGDPVDIRLMAGGVHLKGTITGIARGITDRDNPTGSDLLADVNPTFNWVRLAQRV 301

Query: 261 PVRIAFD--EVPQDFRMIAGRTATVSI 285
           PVRIA D  ++P D  + AG TAT+ +
Sbjct: 302 PVRIAIDTGKLPPDTLIAAGMTATIEV 328