Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 338 a.a., HlyD family secretion protein from Rhodanobacter sp000427505 FW510-R12

 Score =  239 bits (610), Expect = 6e-68
 Identities = 137/327 (41%), Positives = 197/327 (60%), Gaps = 46/327 (14%)

Query: 3   KPLLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVE 62
           KPLL   R+ +T +VV  AA+L   +  +Y+++PWTRDG +RA+V++IAPDVSGL+  V 
Sbjct: 4   KPLLL--RIAVTSVVVIVAALLGHALWKHYLYSPWTRDGRVRAEVVRIAPDVSGLVSAVA 61

Query: 63  VRDNQTVKRGDVLFTIDQDRFTLALRQAKATLGERQETLAQA------------------ 104
           V DNQ V++GD LF ID  RF  A+ QA+A L   + +   A                  
Sbjct: 62  VSDNQLVRKGDPLFAIDPARFRYAVDQAQANLDAAEASARAAGANISAALASAAARKAEY 121

Query: 105 ---SREAQRNRKLGNLVAAEQLEE-------------------SQSREAR--ARSAVSEA 140
              + EA R + LG+++  E+  +                   SQ+   R  A++AV +A
Sbjct: 122 QMRAEEAARRQHLGDVITREERTDAAAVANSARATWAQARAGGSQASAVREQAQAAVEQA 181

Query: 141 QVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFEETK 200
           QVA+D A+L+L+R+ VR+PVDGY+ +   R  ++   G P L+++DS SY++ GYFEETK
Sbjct: 182 QVALDRARLDLERTEVRAPVDGYVTNLDVRVGDYAATGSPRLALIDSHSYYLYGYFEETK 241

Query: 201 LGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRLAQRI 260
           L  +H+GD VDIR+M    RL+G +   A GI DRD  +G +LL +VNP F+WVRLAQR+
Sbjct: 242 LPQLHVGDPVDIRLMAGGVRLKGTITGIARGITDRDNPTGNDLLADVNPTFNWVRLAQRV 301

Query: 261 PVRIAFD--EVPQDFRMIAGRTATVSI 285
           PVRIA D   +P D  + AG TAT+ +
Sbjct: 302 PVRIAIDTSHLPDDTLIAAGMTATIEV 328