Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 416 a.a., Colistin resistance protein EmrA from Xanthobacter sp. DMC5

 Score =  102 bits (255), Expect = 1e-26
 Identities = 99/326 (30%), Positives = 148/326 (45%), Gaps = 69/326 (21%)

Query: 2   KKPLLTLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKV 61
           +KP +  G V+  L V      L W  V  +  +  T D ++ AD   IA  V G ++ V
Sbjct: 61  RKPFI-FGTVLAVLAVAGGWYGLNWWQVGRFQVS--TDDAYVAADTSVIAAKVGGYVKSV 117

Query: 62  EVRDNQTVKRGDVLFTIDQDRFTLALRQAK-------ATLG--ERQETLAQ--------- 103
           +V  NQ VK GDV+  ID   + LAL+ A+       ATL   ++QET A+         
Sbjct: 118 DVDTNQWVKAGDVIARIDDGDYRLALQSAENKIATQEATLSRFDQQETAARATVDQMKAQ 177

Query: 104 -ASREAQRNR--------------------KLGNLVAAEQLEESQSREARARSAVSEAQV 142
            AS EA + R                     L N  A +    +    A+A  A +EAQV
Sbjct: 178 LASAEADQRRAQAEFDRQDKLARSDFASRSTLDNARADKDKTAASVEAAKAAIASAEAQV 237

Query: 143 AV-------------------DTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLS 183
            V                   D A+ +LD +VVR+P+DG + +RA +  + V  G  +++
Sbjct: 238 VVLAAQRTEASHVLDELKTARDQAKRDLDFTVVRAPIDGVVGNRAAQVGQLVQTGTRLVA 297

Query: 184 VVDSASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGA-- 241
           VV   S +VD  F+ET+LG +  G +V++ V             FA  +     +SG+  
Sbjct: 298 VVPLESVYVDANFKETQLGRLKPGQSVNVYVDAYPD------HDFAGKVVSVSPASGSVF 351

Query: 242 NLLPNVNPAFSWVRLAQRIPVRIAFD 267
           +LLP  N   ++ ++ QRIPVRIA D
Sbjct: 352 SLLPPENATGNFTKIVQRIPVRIAID 377