Pairwise Alignments

Query, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

Subject, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

 Score =  283 bits (723), Expect = 4e-81
 Identities = 144/282 (51%), Positives = 199/282 (70%)

Query: 8   LGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQ 67
           LGRV+ T+LVV  A     ++  +Y  APWTRDG +RA+V+QIAPDVSGL+  V +RDNQ
Sbjct: 16  LGRVLFTVLVVAAAVWAGLRLWDHYELAPWTRDGRVRANVVQIAPDVSGLVTAVPIRDNQ 75

Query: 68  TVKRGDVLFTIDQDRFTLALRQAKATLGERQETLAQASREAQRNRKLGNLVAAEQLEESQ 127
            V  G +LF +D+ R+ LA+RQA+A L  ++   AQ  RE  RN  L +LV+ E  E+++
Sbjct: 76  PVAAGTLLFEVDRARYDLAVRQAQAALSAQRAMSAQVQRENARNAGLDDLVSKESREQTR 135

Query: 128 SREARARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDS 187
           SR  + ++AV++A+VA+D+A+LNL R+ VR+P  G + +   R   +  AGRPVL++VD+
Sbjct: 136 SRVEQMQAAVAQAEVALDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVLALVDA 195

Query: 188 ASYHVDGYFEETKLGGIHIGDAVDIRVMGDNTRLRGHVQSFAAGIEDRDRSSGANLLPNV 247
            S++V+GYFEETKL  IH+GD V +  MG    L G V S AAGI D DRS+ ANLLP+V
Sbjct: 196 QSFYVEGYFEETKLPRIHLGDRVRVTPMGGGAVLEGAVDSVAAGIADHDRSTSANLLPSV 255

Query: 248 NPAFSWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSIIEGQ 289
           NP F+WVRLAQRIPVRI  D +PQ  R++AG+T TV ++E +
Sbjct: 256 NPTFNWVRLAQRIPVRIKLDPLPQGARLVAGQTVTVQVLENK 297